Table 4.
Pairwise comparisons of differential expression of the probe sets related to seed storage protein genes at early stage of seed development i.e. 7 days after anthesis (DAA) among the four Indian wheat varieties, viz. C306 and Lok1 were good and Sonalika and WH291 were poor chapatti making varieties
| Probe set ID | Function | Good vs poor | C306 vs Sonalika | C306 vs WH291 | Lok1 vs Sonalika | Lok1 vs WH291 | C306 vs Lok1 | Sonalika vs WH291 |
|---|---|---|---|---|---|---|---|---|
| Ta.24298.1.S1_x_at |
HMW-glutenin subunit Dx5 |
56.7 |
11.0 |
104.8 |
29.6 |
288.6 |
-2.8 |
10.6 |
| Ta.24963.1.S1_x_at |
HMW-glutenin subunit 1By9 |
60.4 |
13.5 |
70.0 |
54.2 |
303.0 |
-3.9 |
4.8 |
| Ta.131.1.S1_at |
LMW-glutenin |
58.9 |
19.7 |
76.7 |
47.2 |
175.0 |
-2.3 |
3.7 |
| Ta.14625.1.S1_x_at |
LMW-glutenin |
106.0 |
39.9 |
121.0 |
90.9 |
313.5 |
-2.4 |
3.6 |
| Ta.23142.5.S1_x_at |
LMW-glutenin |
57.8 |
12.3 |
203.0 |
16.6 |
244.2 |
-1.3 |
15.4 |
| Ta.24114.1.S1_x_at |
Alpha-gliadin |
171.4 |
48.9 |
229.2 |
123.4 |
606.1 |
-2.6 |
4.4 |
| Ta.24114.10.S1_x_at |
Alpha/beta-gliadin |
54.1 |
10.9 |
75.6 |
42.9 |
266.0 |
-4.1 |
6.4 |
| Ta.27778.4.S1_x_at |
Alpha-gliadin |
284.7 |
100.7 |
320.4 |
277.7 |
830.2 |
-2.6 |
3.3 |
| Ta.27778.2.S1_x_at |
Alpha-gliadin |
209.5 |
66.7 |
215.8 |
220.4 |
619.9 |
-3.3 |
3.2 |
| Ta.15268.1.S1_x_at |
Alpha-gliadin |
110.3 |
39.5 |
175.9 |
69.7 |
319.7 |
-1.8 |
4.3 |
| Ta.23896.1.S1_at |
Omega gliadin |
33.1 |
25.9 |
91.3 |
14.3 |
40.7 |
1.8 |
3.4 |
| Ta.160.1.S1_x_at |
Gamma-gliadin |
14.6 |
20.0 |
21.1 |
9.1 |
11.5 |
1.9 |
1.2 |
| Ta.160.2.S1_x_at |
Gamma-gliadin |
13.3 |
26.0 |
27.0 |
5.9 |
7.4 |
4.3 |
1.2 |
| Ta.160.3.S1_x_at |
Gamma-gliadin |
13.6 |
25.7 |
30.6 |
9.5 |
6.0 |
3.5 |
-1.2 |
| Ta.28792.1.S1_x_at |
Gamma-gliadin |
146.9 |
38.2 |
155.4 |
135.1 |
556.7 |
-3.5 |
4.4 |
| Ta.24114.8.S1_at |
Gamma-gliadin |
168.9 |
43.7 |
262.7 |
108.0 |
653.5 |
-2.6 |
6.2 |
| Ta.24114.8.S1_x_at |
Gamma-gliadin |
194.8 |
46.6 |
338.5 |
112.0 |
819.7 |
-2.4 |
7.4 |
| Ta.30782.2.S1_a_at |
Gamma-gliadin |
28.2 |
13.3 |
37.6 |
21.4 |
60.5 |
-1.6 |
2.8 |
| Ta.30782.2.S1_x_at |
Gamma-gliadin |
51.3 |
28.4 |
80.0 |
35.7 |
77.8 |
-1.3 |
2.7 |
| Ta.30782.4.S1_at |
Gamma-gliadin |
98.0 |
24.3 |
186.7 |
53.4 |
415.8 |
-2.1 |
8.0 |
| Ta.6175.1.S1_at |
Gamma-gliadin |
105.9 |
36.7 |
49.1 |
116.2 |
206.2 |
-3.3 |
2.7 |
| Ta.6175.1.S1_x_at |
Gamma-gliadin |
80.9 |
28.7 |
58.8 |
95.9 |
238.9 |
-3.6 |
3.0 |
| Ta.27712.1.S1_at |
Avenin |
86.6 |
26.1 |
156.1 |
50.4 |
297.2 |
-1.8 |
6.3 |
| Ta.27777.1.S2_at |
Avenin |
57.6 |
18.6 |
51.2 |
57.0 |
158.9 |
-2.3 |
3.0 |
| Ta.27777.1.S2_s_at |
Avenin |
122.6 |
37.7 |
208.4 |
74.7 |
411.7 |
-1.9 |
5.6 |
| Ta.9799.1.S1_at |
Avenin |
45.0 |
22.0 |
30.3 |
70.4 |
86.5 |
-2.8 |
1.2 |
| Ta.23142.4.S1_s_at |
Gliadin/avenin |
175.9 |
41.2 |
179.3 |
196.0 |
715.6 |
-3.8 |
4.0 |
| Ta.23142.11.S1_x_at |
Gliadin/avenin |
124.1 |
39.1 |
98.9 |
143.7 |
417.7 |
-3.9 |
2.8 |
| Ta.2415.2.S1_a_at | Gliadin/avenin | 17.4 | 14.8 | 46.1 | 7.4 | 18.8 | 1.9 | 2.5 |