Table 1.
Summary of models chosen in phylogenetic analysis
|
Marker |
COI |
ND2 |
COI + ND2 |
||||||
|---|---|---|---|---|---|---|---|---|---|
| Inference method | NJ | ML | BI | NJ | ML | BI | NJ | ML | BI |
|
Model |
T92 + Γ |
TN93 + Γ |
T92 + Γ |
HKY + Γ |
TN93 + Γ |
||||
|
BIC |
4097,84 |
4101,20 |
2186,19 |
2193,06 |
5311,13 |
||||
|
AIC |
3592,74 |
3572,45 |
2040,86 |
2034,53 |
5038,40 |
||||
|
-Lnl |
1732,16 |
1719 |
998,34 |
993,16 |
2484,13 |
||||
|
Length |
622 |
501 |
1123 |
||||||
|
Number of haplotypes |
30 |
9 |
14 |
||||||
| Overall mean distance (SE) | 0.0176 (0.0062) | 0.0093 (0.0064) | 0.0149 (0.0053) | ||||||
NJ: distance-based Neighbor-Joining, ML: Maximum Likelihood, BI: Bayesian Inference, T92: Tamura 3-parameter model [36], TN93: Tamura-Nei model [37], HKY: Hasegawa-Kishino-Yano model [38], Γ: assuming Gamma distribution (five discrete gamma categories), BIC: Bayesian Information Criterion (score), AIC: corrected Akaike Information Criterion (score), -Lnl: Maximum Likelihood value, SE: Standard Error.