Table 1.
Details of epithelium samples from which FMDV full genome sequences were derived.
| Within outbreak sample ID | Outbreak (OB-) | Outbreak duration | Epi. sample type | Sample collection date | County | World reference laboratory No. | Approximate lesion age (h) | Sequence length (nt) | Total No. of nts sequenced | Average times coverage of each base | GenBank accession No. |
|---|---|---|---|---|---|---|---|---|---|---|---|
| – | Hants | 6 Jan 1967 to 3 Feb 1967 | Bovine tongue | 6 Jan 1967 | Hants | BFS 1810A | N/A | 8177 | 26393 | 3.23 | JX869177 |
| – | Warks | 8 Sep 1967 to 11 Sep 1967 | Bovine DP | 8 Sep 1967 | Warks | BFS 1836 | 6 | 8177 | 45434 | 5.48 | JX869178 |
| A | Shrops | 21 Oct 1967 to 6 Jun 1968 | Bovine foot | 31 Oct 1967 | Shrops | BFS 1848 | 6 | 8176 | 35045 | 4.29 | JX869179 |
| B | Bovine foot | 14 Nov 1967 | Shrops | BFS 1889 | 12 | 8176 | 30647 | 3.75 | JX869180 | ||
| C | Bovine tongue | 8 Dec 1967 | Shrops | BFS 1950 | 6-8 | 8176 | 25659 | 3.14 | JX869181 | ||
| D | Bovine tongue | 6 Jan 1968 | Heref | BFS 11/68 | 12 | 8176 | 30485 | 3.73 | JX869182 | ||
| E | Bovine tongue | 10 Feb 1968 | Staffs | BFS 41/68 | 8 | 8173 | 50125 | 6.13 | JX869183 | ||
| F | Bovine foot | 13 Feb 1968 | Ches | BFS 45/68 | 288 | 8176 | 87275 | 10.68 | JX869184 | ||
| G | Bovine tongue | 22 Mar 1968 | Ches | BFS 63/68 | 8 | 8176 | 51187 | 6.26 | JX869185 | ||
| H | Bovine tongue | 7 Apr 1968 | Ches | BFS 69/68 | 18 | 8176 | 48464 | 5.84 | JX869186 | ||
| I | Bovine tongue | 5 May 1968 | Shrops | BFS 86/68 | 24 | 8176 | 54360 | 6.61 | JX869187 | ||
| J | Ovinea | 4 Jun 1968 | Shrops | BFS 89/68 | N/A | 8176 | 44809 | 5.46 | JX869188 |
N/A not available.
a
Epithelium type not available.