TABLE III.

Comparison of B factor prediction in terms of correlation coefficients by parameter free MND and Gaussian normal mode (GNM) for large-sized data set.⁶¹ The asterisk sign indicates improved prediction with modified protein data.

PDB ID	N	MND	GNM
1AHO	64	0.617	0.562
1ATG	231	0.606	0.497
1BYI	224	0.464	0.552
1CCR	111	0.562	0.351
1E5K	188	0.751	0.859
1EW4	106	0.596	0.547
1IFR	113	0.684	0.637
1NKO	122	0.561	0.368
1NLS	238	0.634	0.523*
1O08	221	0.410	0.309
1PMY	123	0.646	0.685
1PZ4	113	0.859	0.843
1QTO	122	0.378	0.334
1RRO	108	0.334	0.529
1UKU	102	0.650	0.742
1V70	105	0.409	0.162
1WBE	204	0.531	0.549
1WHI	122	0.407	0.270
1WPA	107	0.542	0.417
2AGK	233	0.687	0.512
2C71	205	0.662	0.560
2CG7	90	0.477	0.379
2CWS	227	0.659	0.696
2HQK	213	0.793	0.365
2HYK	237	0.583	0.515
2I24	113	0.380	0.494
2IMF	203	0.615	0.514
2PPN	107	0.637	0.668
2R16	176	0.461	0.618*
2V9V	135	0.580	0.528
2VIM	104	0.375	0.282
2VPA	204	0.771	0.576
2VYO	206	0.705	0.761
3SEB	238	0.777	0.826
3VUB	101	0.638	0.607