Table VII.
Targeting signal predictions summarized in ARABI-COIL for At3g16000 The scores shown in the table were acquired using GenBank accession no. BAB02666. cTP, Chloroplast targeting peptide; mTP, mitochondrial targeting peptide; SP, signal peptide for secretory pathway.
Predicted Signal | Program | Score |
---|---|---|
cTP | TargetP | 0.78 |
cTP | ChloroP | 0.96a |
cTP | Predotar | 0.88 |
mTP | Predotar | 0.15 |
mTP | Mitoprot | 0.72 |
mTP | TargetP | 0.16 |
SP | TargetP | 0.00 |
SP | SignalP HMM | 0.70 |
SP | SignalP NN | 0.46 |
NLS | PredictNLS | 1.00b |
NLS | PSORT | 0.07 |
No signal | TargetP | 0.06 |
ChloroP prediction scores were normalized to a 0 to 1 scale
PredictNLS generates a `yes' = 1/`no' = 0 prediction