Table 1.
Method | Thresholds | Selection | False | Error | AUC |
---|---|---|---|---|---|
FCROS |
0.002348226, 0.998 |
198 |
2 |
1.0% |
0.9999928 |
FC |
1.5922 |
198 |
1 |
0.5% |
0.9999933 |
WAD |
1.2072 |
198 |
17 |
8.5% |
0.9981039 |
RP |
0.00009 |
198 |
1 |
0.5% |
0.9999985 |
Ttest |
0.00059892 |
198 |
6 |
3% |
0.9999356 |
SAM |
0.0007 |
198 |
3 |
1.5% |
0.9999691 |
TREAT | 0.00078531 | 198 | 1 | 0.5% | 0.9999990 |
Synthetic dataset 2: Selection, errrors and AUC for the seven methods. Error is calculated as the number of false genes detected divided by 198, the number of true DE genes in the dataset.