Table S1.
Phylum ranking, number of families and average number of bacterial OTUs (± s.e.) in domestic and feral goats.
| Phylum | Phylum Ranking | N Families | Average N OTUs | |||
|---|---|---|---|---|---|---|
| Domestic | Feral | Domestic | Feral | Domestic (N = 5) | Feral (N = 4) | |
| Firmicutes | 1 | 1 | 25 | 25 | 485 ± 23.9 | 421 ± 21.9 |
| Proteobacteria | 2 | 2 | 70 | 59 | 340 ± 47.5 | 326 ± 31.0 |
| Actinobacteria | 3 | 3 | 31 | 29 | 115 ± 10.5 | 93 ± 2.1 |
| Bacteroidetes | 4 | 4 | 11 | 11 | 88 ± 4.8 | 82 ± 6.9 |
| Acidobacteria | 5 | 5 | 2 | 2 | 40 ± 1.7 | 37 ± 3.7 |
| Spirochaetes | 6 | 11 | 2 | 2 | 28 ± 2.1 | 9 ± 4.1 |
| Chloroflexi | 7 | 6 | 1 | 1 | 25 ± 1.4 | 22 ± 1.8 |
| Unclassified | 8 | 7 | 1 | 1 | 23 ± 1.3 | 20 ± 1.0 |
| Verrucomicrobia | 9 | 8 | 5 | 5 | 21 ± 0.6 | 19 ± 1.0 |
| Cyanobacteria | 10 | 9 | 1 | 1 | 14 ± 2.0 | 16 ± 4.6 |
| Planctomycetes | 11 | 10 | 4 | 4 | 12 ± 0.7 | 13 ± 0.6 |
| Gemmatimonadetes | 12 | 12 | 1 | 1 | 7 ± 0.7 | 6 ± 1.1 |
| Chlorobi | 13 | 15 | 2 | 2 | 6 ± 0.8 | 4 ± 0.7 |
| OP10 | 14 | 14 | 1 | 1 | 5 ± 0.6 | 4 ± 0.3 |
| TM7 | 15 | 16 | 1 | 1 | 5 ± 0.4 | 4 ± 0.9 |
| Synergistes | 16 | 19 | 1 | 1 | 5 ± 0.4 | 3 ± 0.3 |
| Natronoanaerobium | 17 | 13 | 1 | 1 | 4 ± 0.7 | 5 ± 0.5 |
| Deinococcus-Thermus | 18 | 17 | 1 | 1 | 4 ± 0.0 | 4 ± 0.0 |
| OP9/JS1 | 19 | 22 | 1 | 1 | 4 ± 0.6 | 3 ± 0.5 |
| NC10 | 20 | 18 | 1 | 1 | 4 ± 0.2 | 4 ± 0.3 |
| Nitrospira | 21 | 24 | 1 | 1 | 3 ± 0.6 | 3 ± 0.6 |
| Lentisphaerae | 22 | 20 | 1 | 1 | 3 ± 0.0 | 3 ± 0.0 |
| OP3 | 23 | 21 | 1 | 1 | 3 ± 0.0 | 3 ± 0.0 |
| BRC1 | 24 | 25 | 1 | 1 | 3 ± 0.0 | 3 ± 0.5 |
| Chlamydiae | 25 | 23 | 3 | 3 | 2 ± 0.2 | 3 ± 0.3 |
| Aquificae | 26 | 27 | 2 | 2 | 2 ± 0.4 | 2 ± 0.5 |
| marine group A | 27 | 29 | 1 | 1 | 2 ± 0.5 | 1 ± 0.3 |
| Caldithrix | 28 | 26 | 1 | 1 | 2 ± 0.0 | 2 ± 0.0 |
| WS3 | 29 | 28 | 1 | 1 | 2 ± 0.2 | 2 ± 0.3 |
| SPAM | 30 | 30 | 1 | 1 | 1 ± 0.2 | 1 ± 0.0 |
| DSS1 | 31 | 31 | 1 | 1 | 1 ± 0.2 | 1 ± 0.0 |
| TM6 | 32 | 35 | 1 | 1 | 1 ± 0.2 | 1 ± 0.3 |
| LD1PA group | 33 | 32 | 1 | 1 | 1 ± 0.0 | 1 ± 0.0 |
| OP8 | 34 | 33 | 1 | 1 | 1 ± 0.0 | 1 ± 0.0 |
| Thermodesulfobacteria | 35 | 34 | 1 | 1 | 1 ± 0.0 | 1 ± 0.0 |
| AD3 | 36 | 36 | 1 | 1 | 1 ± 0.0 | 1 ± 0.3 |
| Thermotogae | 37 | 37 | 1 | 1 | 1 ± 0.2 | 1 ± 0.3 |
| WS5 | 38 | 38 | 1 | 1 | 1 ± 0.2 | 1 ± 0.3 |
| Coprothermobacteria | 39 | 39 | 1 | 1 | 1 ± 0.2 | 1 ± 0.3 |
| OD1 | 40 | 41 | 1 | 0 | 1 ± 0.2 | 0 ± 0.0 |
| Deferribacteres | 41 | 40 | 1 | 1 | 1 ± 0.2 | 0 ± 0.3 |
| Termite group 1 | 42 | 42 | 1 | 0 | 0 ± 0.4 | 0 ± 0.0 |