Skip to main content
. 2014 Jan 23;9(1):e86150. doi: 10.1371/journal.pone.0086150

Table 2. Distribution of the genome-mapped sequence reads in small RNA libraries.

Locus class Uni-sRNA-E13 Tot-sRNA-E13 Uni-sRNA-E19 Tot-sRNA-E19 Uni-sRNA-E27 Tot-sRNA-E27
Total reads 822873 14580115 389934 13016970 508157 15549081
Exon antisense 161(0.02%) 203(0.00%) 120(0.03%) 259(0.00%) 153(0.03%) 199(0.00%)
Exon sense 19443(2.36%) 86061(0.596%) 8091(2.07%) 62064(0.48%) 12929(2.54%) 106325(0.68%)
Intron antisense 486(0.06%) 6887(0.05%) 263(0.07%) 1262(0.01%) 431(0.08%) 5383(0.03%)
Intron sense 1471(0.18%) 3228(0.02%) 762(0.20%) 1565(0.01%) 1169(0.23%) 3270(0.02%)
miRNA 41574(5.05%) 7115935(48.41%) 33123(8.49%) 10634771(81.70%) 31677(6.23%) 11870273(76.34%)
rRNA 142358(17.30%) 3900741(26.75%) 68824(17.65%) 1233686(9.48%) 77941(15.34%) 1906629(12.26%)
Repeat 968(0.12%) 6633(0.05%) 505(0.13%) 1183(0.01%) 807(0.16%) 4185(0.03%)
scRNA 3214(.039%) 84673(0.58%) 2004(0.51%) 37393(0.29%) 1841(0.36%) 30917(0.20%)
snRNA 5810(0.71%) 44309(0.30%) 2816(0.72%) 12117(0.09%) 4326(0.85%) 34368(0.22%)
snoRNA 2502(0.30%) 18504(0.13%) 1292(0.33%) 7721(0.06%) 2120(0.42%) 20483(0.13%)
tRNA 21767(2.65%) 359561(2.47%) 13311(3.41%) 165488(1.27%) 13485(2.65%) 180390(1.16%)
Unannotated reads 583119(70.86%) 2953380(20.26%) 258823(66.38%) 859461(6.60%) 361278(71.10%) 1386659(8.92%)