Table 1. Gene content of the SCCmec element in Staphylococcus haemolyticus SH32.
Locus | Position1 | Regions | Characteristic genes | Description |
SHP0065 | 70295–70774 | orfX | rRNA large subunit methyltransferase | |
SHP0066 | 70903–71889 | J3 | ADP-ribosylglycohydrolase | |
SHP0067 | 71908–73242 | Permease | ||
SHP0068 | 73239–74177 | truncated ribokinase | ||
SHP0069 | 74215–74889 | IS431 | transposase for IS431mec | |
SHP0070 | 75693–75346 | transcriptional regulator | ||
SHP0071 | 75771–76454 | ThiJ/PfpI family protein | ||
SHP0072 | 76476–77141 | NAD dependent epimerase/dehydratase | ||
SHP0073 | 77145–78149 | Oxidoreductase | ||
SHP0074 | 78158–78523 | hypothetical protein | ||
SHP0075 | 79059–79676 | cadD | cadmium binding protein CadD | |
SHP0076 | 79695–80036 | cadX | cadmium resistant accessory protein | |
SHP0077 | 80457–80056 | arsC | arsenate reductase | |
SHP0078 | 81764–80475 | arsB | arsenical pump membrane protein | |
SHP0079 | 82081–81764 | arsR | arsenical resistance operon repressor | |
SHP0080 | 82211–82885 | mec gene complex | IS431 | transposase for IS-like element |
SHP0081 | 83061–85067 | mecA | penicillin-binding protein 2′ | |
SHP0082 | 85541–85113 | uncharacterized protein ydem | ||
SHP0083 | 86381–85638 | glycerophosphoryl diester phosphodiesterase | ||
SHP0084 | 87465–87298 | 3-hydroxy-3-methylglutaryl CoA synthase | ||
SHP0085 | 87723–88397 | IS431 | transposase for IS-like element | |
SHP0086 | 88660–90720 | J2R | copA | P-type ATPase copper (Cu2+) transporter |
SHP0087 | 90735–92168 | multicopper oxidase mco | ||
SHP0088 | 92188–92478 | putative lipoprotein | ||
SHP0089 | 93079–92684 | arsC | arsenate reductase | |
SHP0090 | 94390–93098 | arsB | arsenite-antimonite efflux pump | |
SHP0091 | 94704–94390 | arsR | arsenic resistance operon repressor | |
SHP0092 | 94844–94701 | hypothetical protein | ||
SHP0093 | 96574–94844 | arsA | arsenite-activated ATPase | |
SHP0094 | 96902–96555 | arsD | arsenical resistance operon trans-acting | |
repressor | ||||
SHP0095 | 97185–97379 | hypothetical protein | ||
SHP0096 | 97425–97745 | ArsR family transcriptional regulator | ||
SHP0097 | 97833–98717 | putative permease | ||
SHP0098 | 98731–98859 | hypothetical protein | ||
SHP0099 | 99411–99295 | J2L | hypothetical protein | |
SHP0100 | 99585–99977 | type III R-M system enzyme, M subunit | ||
SHP0101 | 100048–101532 | type III R-M system protein | ||
SHP0102 | 101534–104503 | type III R-M, res subunit | ||
SHP0103 | 104510–105802 | hypothetical protein | ||
SHP0104 | 105786–107660 | type III R-M, res subunit | ||
SHP0105 | 107961–107842 | hypothetical protein | ||
SHP0106 | 108112–107981 | hypothetical protein | ||
SHP0107 | 108630–108127 | hypothetical protein | ||
SHP0108 | 108959–108648 | hypothetical protein | ||
SHP0109 | 109396–109046 | hypothetical protein | ||
SHP0110 | 110695–109961 | cyclopentanol dehydrogenase | ||
SHP0111 | 112423–110777 | ccr gene complex | ccrB | cassette chromosome recombinase B |
SHP0112 | 113793–112459 | ccrA | cassette chromosome recombinase A | |
SHP0113 | 114595–113981 | J1 | cch | cassette chromosome helicase |
SHP0114 | 114682–114957 | ΨccrA | cassette chromosome recombinase A | |
SHP0115 | 115428–115069 | zinc/iron permease | ||
SHP0116 | 115635–115961 | HTH-type transcriptional repressor CzrA | ||
SHP0117 | 116291–118216 | cadmium-translocating P-type ATPase | ||
SHP0118 | 119212–118538 | IS431 | transposase for IS431mec |
gene position in the contig (accession number: KF006347).