TABLE 2.
Genes up-regulated in HBVPs after LPS treatment (>5-fold). GEO accession number GSE46236
| Gene name | Accession no. | -Fold change | p value | False discovery rate |
|---|---|---|---|---|
| CXCL10 | NM_001565 | 59.39 | 3.66E − 04 | 4.82E − 01 |
| CCL20 | NM_004591 | 38.33 | 1.03E − 05 | 4.23E − 02 |
| IL8 | NM_000584 | 32.41 | 2.93E − 06 | 2.11E − 02 |
| CXCL1 | NM_001511 | 23.04 | 1.73E − 06 | 1.66E − 02 |
| IL6 | NM_000600 | 16.38 | 3.09E − 03 | 9.99E − 01 |
| CCL2 | NM_002982 | 15.52 | 2.47E − 08 | 7.11E − 04 |
| TNFAIP3 | NM_006290 | 15.08 | 5.19E − 05 | 1.38E − 01 |
| ICAM1 | NM_000201 | 14.18 | 6.46E − 05 | 1.43E − 01 |
| IL1B | NM_000576 | 12.66 | 4.10E − 05 | 1.31E − 01 |
| VCAM1 | NM_001078 | 11.71 | 4.77E − 06 | 2.75E − 02 |
| PTGS2 | NM_000963 | 10.99 | 1.02E − 03 | 8.85E − 01 |
| CXCL2 | NM_002089 | 8.53 | 7.61E − 06 | 3.65E − 02 |
| TNFAIP2 | NM_006291 | 8.52 | 1.27E − 03 | 9.99E − 01 |
| TNFAIP5 | NM_002852 | 6.56 | 1.09E − 04 | 2.08E − 01 |
| TNFSF18 | NM_005092 | 6.54 | 1.73E − 06 | 1.66E − 02 |
| TNFAIP6 | NM_007115 | 5.93 | 3.69E − 04 | 4.82E − 01 |
| SELE | NM_000450 | 5.83 | 4.36E − 02 | 9.99E − 01 |
| IL1A | NM_000575 | 5.64 | 2.37E − 02 | 9.99E − 01 |
| MX1 | NM_002462 | 5.36 | 9.46E − 02 | 9.99E − 01 |
| LIF | NM_002309 | 5.19 | 2.39E − 03 | 9.99E − 01 |
| SOD2 | NM_001024465 | 5.15 | 1.02E − 04 | 2.08E − 01 |
| CLDN1 | NM_021101 | 5.06 | 5.39E − 03 | 9.99E − 01 |
| CXCL6 | NM_002993 | 5.02 | 1.42E − 03 | 9.99E − 01 |