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. Author manuscript; available in PMC: 2015 Feb 5.
Published in final edited form as: J Comput Chem. 2013 Dec 3;35(4):309–312. doi: 10.1002/jcc.23499

Table 1.

Effect of the side chain of residue X on computed 13C′ shielding

Xa Δb (ppm)

Thr 4.3
1.9
1.5

Asp 0.9
1.1
1.6

Val 0.6
0.9
2.7

Met 0.7
0.3
1.6

Trp 2.3
0.6
0.9

Tyr 1.2
−0.4
1.0

Gln 1.5
0.5
1.5

Ile 3.2
1.5
1.8
a

Results of the computed 13C′ shielding for residue X in the tripeptide: Ac-GXA-NMe, for X in column 1. All the listed results were obtained by assuming that the backbone torsional angles (φ,ψ) of residue A were fixed (as indicated in the Materials and Methods section) at an extended conformation, namely φ = −140° and ψ = +140°. However, among all the possible values of the backbone torsional angles (φ,ψ) of residue X, sampled every 10°, the set φ = −60° and ψ = −30° was chosen because a computed 13C′ shielding value exists for all the listed residues for this particular set of backbone torsional angles.

b

For each residue X there are three Δ values (see Methods section); each of these values corresponds to a difference, Δ computed by using a given χ1 side-chain rotamer of X, namely −180°, −60° or +60°. For all the listed residues there is, at least, one second-order difference, between Δ values, > 0.5 ppm, indicating the need to consider the side-chain effect for an accurate computation of the 13C′ shielding of residue X, as mentioned in the Materials and Methods section.