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. Author manuscript; available in PMC: 2014 Jan 27.
Published in final edited form as: Stat Sin. 2011 Oct 1;21(4):1515–1540. doi: 10.5705/ss.2009.316

Table 3.

Yeast cell cycle study. Identified cooperative pairs of TFs involved in the cell cycle process.

adaptive group Lasso
group Lasso
MBP1-SWI6, MBP1-SWI6,
MCM1-NDD1, MCM1-NDD1,
FKH2-MCM1, FKH2-MCM1,
FKH2-NDD1, FKH2-NDD1,
SWI4-SWI6, SWI4-SWI6,
FHC1-GAT3, FHL1-GAT3
NRG1-YAP6, NRG1-YAP6,
GAT3-MSN4, GAT3-MSN4,
REB1-SKN7, REB1-SKN7
ACE2-REB1, ACE2-REB1,
GCN4-SUM1, GAL4-RGM1,
FKH1-FKH2, GCN4-SUM1
CIN5-NRG1, FKH1-FKH2,
SMP1-SWI5, CIN5-NRG1,
FKH1-NDD1, SMP1-SWI5
ACE2-SWI5, FKH1-NDD1,
CIN5-YAP6, ACE2-SWI5,
STB1-SWI4, CIN5-YAP6
ARG81-GCN4, STB1-SWI4,
NDD1-STB1, ARG81-GCN4,
NRG1-PHD1. NDD1-STB1,
DAL81-STP1,
NRG1-PHD1.

No. of pairs 21 23