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. 2013 Oct 21;42(2):1052–1064. doi: 10.1093/nar/gkt932

Figure 1.

Figure 1.

Basic statistic information of R. opacus PD630 genome. (A) Length distribution of predicted R. opacus PD630 ORFs. The average length of all genes is 928 bp, with most genes ranging from 200 to 1600 bp. The number of genes in each category is noted above each bar. (B) Distribution of the copy numbers of homologous genes among all 8947 genes. Homologous genes were detected using BLASTP with an e-value cutoff of 1.0E-20 and identity of 50%. The number of genes in each category is noted above each bar. (C) The average C + G content of all genes was 67.47% (solid red line). One percent of the genes fell outside the upper and lower green-dotted lines and had markedly higher or lower G + C contents. (D) Venn diagram comparing the whole genomes of R. opacus PD630, R. jostii RHA1 and R. opacus B4. All proteins in R. opacus PD630 were compared with those in R. jostii RHA1 and R. opacus B4 using BLASTP with an e-value cutoff of 1.0E-20 and an identity of 50%.