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. 2004 Feb 24;32(4):e42. doi: 10.1093/nar/gnh039

Table 1. The DNAs from the apoE gene and PNA probes used for the present genotypinga,b.

Sense strands in apoE gene
(1) 112 codon (Sense) 203mer
 apoE(S112T) (112Cys) 5′···(3925)ATGGAGGACGTGTGCGGCCGCCTGGTG(3951)···3′
 apoE(S112C) (112Arg) 5′···(3925)ATGGAGGACGTGCGCGGCCGCCTGGTG(3951)···3′
 PNA(S112A) H2NCO-(Gly)-TGCACACGCC-NH2 10mer
 PNA(S112G) H2NCO-(Gly)-TGCACGCGCC-NH2 10mer
(2) 158 codon (Sense) 106mer
 apoE(S158T) (158Cys) 5′···(4063)GACCTGCAGAAGTGCCTGGCAGTGTAC(4089)···3′
 apoE(S158C) (158Arg) 5′···(4063)GACCTGCAGAAGCGCCTGGCAGTGTAC(4089)···3′
 PNA(S158G) H2NCO-(Gly)-TCTTCGCGGA-NH2 10mer
Antisense strands in apoE gene
(1) 158 codon (Antisense) 203mer
 apoE(A158A) (158Cys) 5′···(4089)GTACACTGCCAGGCACTTCTGCAGGTC(4063)···3′
 apoE(A158G) (158Arg) 5′···(4089)GTACACTGCCAGGCGCTTCTGCAGGTC(4063)···3′
 PNA(A158T) H2NCO-(Lys)-GTCCGTGAAGAC-NH2 12mer
 PNA(A158C) H2NCO-(Lys)-GTCCGCGAAGAC-NH2 12mer

aThe underlined part of DNA substrate is complementary with the PNA probe, and the polymorphic nucleotide is in bold.

bThe sequence data are from DDBJ/EMBL/GenBank accession no. AF261279.