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Representation of the structural domains and locations of the miRNA target sequences within domain 3 (the central region) and domain domain 3–4 of the FMDV IRES. (A) The secondary structure of the IRES element of FMDV O/HN/CHA/93 was predicted and referred to Kuhn et al. [11]. (B) The displayed sequences of the selected FMDVs were compared by using MegAlign software (DNASTAR Inc., Madison, WI) and the different nucleotides are indicated in box.
