Table 4. PCR primer sequences designed for genes validated in this study.
LEUKOLOCK | ||
Gene | Sequence | Product Size |
FOXP1 S | ctctgtcatcacaaccaccag | 138 |
AS | ggtggtctaacttctgcgttc | |
IL23R S | ggcaagaagtacttggtttgg | 128 |
AS | atagtctcagccctggaaatg | |
CDK1 S | aggtcaagtggtagccatgaa | 108 |
AS | tttggatgacgaagttccttt | |
EGR1 S | gagaaggtgctggtggagac | 142 |
AS | cactgaccaagctgaagagg | |
MBNL3 S | tccatcaattccagctaatcc | 112 |
AS | tccaggaatcagaacaggtg | |
SSPN S | ttacctgtgagaccacactcg | 108 |
AS | cagtgacgctggtacagtcc |
Samples of cDNA were diluted 1∶10, and 2.5 ul were used per PCR reaction for all genes except EHBP1, where 4 µl was used with 5x Brilliant III Ultra Fast SYBR Green QPCR Master Mix (Agilent). In all cases primer concentrations were optimised to 300 mM (S, sense strand; AS, antisense strand)