Table 2.
Taxa used in the phylogenetic analyses with their GenBank accession numbers. Newly generated accessions marked in bold.
| Species | Voucher | Appearance in tree* | SSU | LSU | RPB2 | TEF1-alpha | ITS |
|---|---|---|---|---|---|---|---|
| Acanthonitschkea argentinensis | SMH 1395 | 1 | _ | AY695259 | FJ968943 | FJ969042 | _ |
| Acremonium alcalophilum | CBS 114.92 | 1, 2 | JX158486 | JX158443 | JX158465 | JX158399 | JX158421 |
| Acremonium antarcticum | CBS 987.87 | 1, 2 | JX158487 | JX158444 | JX158466 | JX158400 | JX158422 |
| Acremonium brunnescens | CBS 559.73 | 2 | HQ231966 | _ | |||
| Acremonium cucurbitacearum | CBS 683.88 | 2 | HQ231968 | _ | |||
| Acremonium furcatum | CBS 122.42 | 2 | EF543831 | AY378154 | |||
| Acremonium murorum | CBS 154.25 | 1 | FJ176824 | FJ176880 | FJ238363 | _ | _ |
| Acremonium nepalense | CBS 971.72 | 2 | HQ231970 | DQ825971 | |||
| Acremonium persicinum | CBS 310.59 | 1 | FJ176822 | FJ176878 | FJ238361 | _ | _ |
| Acremonium restrictum | CBS 178.40 | 2 | HQ232119 | _ | |||
| Acremonium strictum | CBS 346.70 | 1 | FJ176823 | FJ176879 | FJ238362 | _ | GQ376096 |
| Acremonium stromaticum | CBS 863.73 | 2 | HQ232143 | DQ825969 | |||
| Acrostalagmus annulatus | DAOM 212126 | 2 | GU180646 | GU180632 | |||
| Acrostalagmus luteoalbus | CBS 194.87 | 2 | EF543826 | _ | |||
| Apiognomonia errabunda | AR 2813 | 1 | DQ862045 | AF408334 | DQ862014 | DQ862030 | DQ313525 |
| Bionectria ochroleuca | 1 | DQ862044 | DQ862027 | DQ862013 | DQ862029 | _ | |
| Camarops microspora | CBS 649.92 | 1 | DQ471036 | AY083821 | DQ470937 | DQ471108 | _ |
| Camarops ustulinoides | DEH 2164 | 1 | DQ470989 | DQ470941 | DQ470882 | DQ471050 | _ |
| Cercophora caudata | CBS 606.72 | 1 | DQ368659 | AY999113 | DQ368646 | _ | AY999135 |
| Chaetosphaerella phaeostroma | SMH 4257 | 1 | _ | AY695264 | FJ968940 | FJ969004 | _ |
| Colletotrichum boninense | CMT74 | 2 | JQ754138 | _ | |||
| Colletotrichum gloeosporioides | CMT32 | 2 | JQ754114 | _ | |||
| Coniochaeta ostrea | CBS 507.70 | 1 | DQ471007 | DQ470959 | DQ470909 | DQ471078 | _ |
| Cordyceps cardinalis | OSC 93609 | 1 | AY184973 | AY184962 | DQ522422 | DQ522325 | _ |
| Cryphonectria parasitica | ATCC 38755 | 1 | DQ862048 | EU199123 | DQ862017 | DQ862033 | AY141856 |
| Cryptosporella hypodermia | CBS 171.69 | 1 | DQ862049 | DQ862028 | DQ862018 | DQ862034 | EU199225 |
| Diaporthe eres | CBS 109767 | 1 | DQ471015 | _ | DQ470919 | DQ479931 | DQ491514 |
| Diatrype disciformis | CBS 197.49 | 1 | DQ471012 | DQ470964 | DQ470915 | DQ471085 | _ |
| Didymostilbe echinofibrosa | AR 2824 | 1 | AY489674 | AY489706 | _ | AY489601 | DQ135999 |
| Epichloe typhina | ATCC 56429 | 1 | U32405 | _ | DQ522440 | AF543777 | JN049832 |
| Eutypa lata | CBS 208.87 | 1 | DQ836896 | DQ836903 | DQ836889 | DQ836909 | DQ006927 |
| Fracchiaea broomeana | SMH 2809 | 1 | _ | AY695268 | FJ968942 | FJ969039 | _ |
| Gelasinospora tetrasperma | CBS 178.33 | 1 | DQ471032 | DQ470980 | DQ470932 | DQ471103 | AY681178 |
| Gibellulopsis nigrescens | DAOM 226890 | 2 | GU180648 | GU180631 | |||
| Gibellulopsis piscis | CBS 892.70 | 2 | EF543835 | DQ825985 | |||
| Glomerella acutata | ICMP4850 | 2 | JN939938 | _ | |||
| Glomerella cingulata | FAU 553 | 1, 2 | AF543762 | AF543786 | _ | AF543773 | _ |
| Gnomonia gnomon | CBS 199.53 | 1 | DQ471019 | AF408361 | DQ470922 | DQ471094 | DQ491518 |
| Graphostroma platystoma | CBS 270.87 | 1 | DQ836900 | DQ836906 | DQ836893 | DQ836915 | _ |
| Heleococcum aurantiacum | CBS 201.35 | 1 | _ | JX158442 | JX158464 | JX158397 | JX158419 |
| Heleococcum japonense | CBS 397.67 | 1 | JX158485 | JX158441 | JX158463 | JX158398 | JX158420 |
| Hydropisphaera erubescens | ATCC 36093 | 1 | AY545722 | AY545726 | AY545731 | DQ518174 | _ |
| Hypocrea americana | OSC 100005 | 1 | AY544693 | AY544649 | _ | DQ471043 | DQ491488 |
| Hypocrea lutea | ATCC 208838 | 1 | AF543768 | AF543791 | DQ522446 | AF543781 | _ |
| Lasiosphaeria ovina | SMH 4605 | 1 | DQ836894 | AY436413 | AY600284 | DQ836908 | AY587923 |
| Leucostoma niveum | AR 3413 | 1 | DQ862050 | AF362558 | DQ862019 | DQ862035 | _ |
| Lignincola laevis | JK 5180A | 1 | U46873 | U46890 | DQ836886 | _ | _ |
| Lindra thalassiae | JK 5090A | 1 | DQ470994 | DQ470947 | DQ470897 | DQ471065 | DQ491508 |
| Lulworthia grandispora | JK 4686 | 1 | DQ522855 | DQ522856 | DQ518181 | DQ497608 | _ |
| Melanconis alni | AR 3500 | 1 | DQ862052 | AF408371 | DQ862021 | DQ862037 | _ |
| Melanconis marginalis | AR 3442 | 1 | DQ862053 | AF408373 | DQ862022 | DQ862038 | _ |
| Melanconis stilbostoma | AR 3501 | 1 | DQ862054 | AF408374 | DQ862023 | DQ862039 | _ |
| Melanopsamma pomiformis | ATCC 18873 | 1 | AY489677 | AY489709 | EF692511 | AY489604 | AF081478 |
| Melanospora tiffanii | ATCC 15515 | 1 | AY015619 | AY015630 | AY015637 | _ | _ |
| Melanospora zamiae | ATCC 12340 | 1 | AY046578 | U17405 | AY046580 | _ | _ |
| Microascus trigonosporus | CBS 218.31 | 1 | DQ471006 | DQ470958 | DQ470908 | DQ471077 | DQ491513 |
| Musicillium theobromae | CBS 968.72 | 2 | EF543838 | EF543859 | |||
| (Verticillium theobromae) 1 | |||||||
| Musicillium theobromae | CBS 458.51 | 2 | EF543837 | EF543858 | |||
| (Verticillium theobromae) 2 | |||||||
| Peethambara spirostriata | CBS 110115 | 1 | AY489692 | AY489724 | EF692516 | AY489619 | _ |
| Petriella setifera | CBS 437.75 | 1 | DQ471020 | DQ470969 | DQ836883 | DQ836911 | _ |
| Plectosphaerella alismatis | CBS 113362 | 2 | JF780521 | JF780523 | |||
| Plectosphaerella citrullae 1 | Plect 189 | 2 | HQ239050 | HQ238964 | |||
| Plectosphaerella citrullae 2 | Plect 157 | 2 | HQ239048 | HQ238962 | |||
| Plectosphaerella cucumerina | DAOM 226828 | 1, 2 | GU180612 | GU180647 | GU180663 | _ | GU180630 |
| Plectosphaerella melonis | Plect 148 | 2 | HQ239007 | HQ238968 | |||
| Plectosphaerella pauciseptata | Plect 186 | 2 | HQ239012 | HQ238971 | |||
| Plectosphaerella plurivora | Plect 329 | 2 | HQ239017 | HQ238972 | |||
| Plectosphaerella ramiseptata | Plect 158 | 2 | HQ239049 | HQ238963 | |||
| Pleospora herbarum | CBS 191.86 | 1 | DQ247812 | DQ247804 | DQ247794 | DQ471090 | DQ491516 |
| Podospora fimiseda | CBS 990.96 | 1 | _ | AY346296 | AY780190 | _ | AY515361 |
| Roumegueriella rufula | CBS 346.85 | 1 | DQ522561 | DQ518776 | DQ522461 | DQ522355 | _ |
| Selinia pulchra | AR 2812 | 1 | _ | GQ505992 | _ | HM484841 | HM484859 |
| Sodiomyces alkalinus F7 | CBS 132729 | 1, 2 | JX158467 | JX158423 | JX158445 | JX158379 | JX158401 |
| Sodiomyces alkalinus F8 | CBS 133680 | 1, 2 | JX158468 | JX158424 | JX158446 | JX158380 | JX158402 |
| Sodiomyces alkalinus F9 | CBS 133681 | 1, 2 | JX158469 | JX158425 | JX158447 | JX158381 | JX158403 |
| Sodiomyces alkalinus F10 | CBS 132730 | 1, 2 | JX158470 | JX158426 | JX158448 | JX158382 | JX158404 |
| Sodiomyces alkalinus F11 | CBS 110278 | 1, 2 | JX158471 | JX158427 | JX158449 | JX158383 | JX158405 |
| Sodiomyces alkalinus F12 | CBS 132731 | 1, 2 | JX158472 | JX158428 | JX158450 | JX158384 | JX158406 |
| Sodiomyces alkalinus F13 | CBS 132732 | 1, 2 | JX158473 | JX158429 | JX158451 | JX158385 | JX158407 |
| Sodiomyces alkalinus F14 | CBS 133682 | 1, 2 | JX158474 | JX158430 | JX158452 | JX158386 | JX158408 |
| Sodiomyces alkalinus F15 | CBS 133683 | 1, 2 | JX158475 | JX158431 | JX158453 | JX158387 | JX158409 |
| Sodiomyces alkalinus F16 | CBS 133684 | 1, 2 | JX158476 | JX158432 | JX158454 | JX158388 | JX158410 |
| Sodiomyces alkalinus F17 | CBS 133685 | 1, 2 | JX158477 | JX158433 | JX158455 | JX158389 | JX158411 |
| Sodiomyces alkalinus F18 | CBS 132733 | 1, 2 | JX158478 | JX158434 | JX158456 | JX158390 | JX158412 |
| Sodiomyces alkalinus F19 | CBS 133686 | 1, 2 | JX158479 | JX158435 | JX158457 | JX158391 | JX158413 |
| Sodiomyces alkalinus F20 | CBS 133687 | 1, 2 | JX158480 | JX158436 | JX158458 | JX158392 | JX158414 |
| Sodiomyces alkalinus F21 | CBS 133688 | 1, 2 | JX158481 | JX158437 | JX158459 | JX158393 | JX158415 |
| Sodiomyces alkalinus F22 | CBS 133689 | 1, 2 | JX158482 | JX158438 | JX158460 | JX158394 | JX158416 |
| Sodiomyces alkalinus F23 | CBS 133690 | 1, 2 | JX158483 | JX158439 | JX158461 | JX158395 | JX158417 |
| Sodiomyces alkalinus F24 | CBS 133691 | 1, 2 | JX158484 | JX158440 | JX158462 | JX158396 | JX158418 |
| Stachylidium bicolor | DAOM 226658 | 2 | GU180651 | _ | |||
| Torrubiella alba (Lecanicillium alba) | CBS 726.73a | 1 | AF339586 | AF339537 | EF468934 | EF468781 | AJ292464 |
| Varicosporina ramulosa | RVG 113 | 1 | U43846 | U44092 | DQ836888 | _ | _ |
| Verticillium albo-atrum | CBS 130.51 | 2 | HQ231976 | DQ825977 | |||
| Verticillium alfalfae | PD683 | 2 | _ | JN187991 | |||
| Verticillium dahliae | ATCC 16535 | 1, 2 | AY489705 | DQ470945 | DQ522468 | AY489632 | _ |
| Verticillium isaacii | PD752 | 2 | _ | JN188018 | |||
| Verticillium zaregamsianum | PD739 | 2 | _ | JN188008 | |||
| Xylaria acuta | ATCC 56487 | 1 | AY544719 | AY544676 | DQ247797 | DQ471048 | AF163026 |
| Xylaria hypoxylon | OSC 100004 | 1 | AY544692 | AY544648 | DQ470878 | DQ471042 | DQ491487 |
*
Appears in large scale tree (1), small scale tree (2) or both