Table 4. Matthews Correlation Coefficient of the Models for the Internal Test Set Predictions (10-Fold Cross-Validations Are Provided in the Parentheses)a.
BestFirst descriptor models |
||||
---|---|---|---|---|
classification methods | MOE | MACCS | SS-FP | combined |
RF | 0.60 (0.64) | 0.47 (0.55) | 0.40 (0.43) | 0.63 (0.66) |
SVM | 0.61 (0.55) | 0.31 (0.38) | 0.40 (0.38) | 0.59 (0.59) |
KNN | 0.61 (0.61) | 0.43 (0.46) | 0.40 (0.41) | 0.61 (0.59) |
BQSAR | 0.54 (0.63) | 0.35 (0.41) | 0.32 (0.41) | 0.51 (0.57) |
Note: RF, random forest; SVM, support vector machine; kNN, kappa nearest neighbor; BQSAR, binary QSAR.