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. 2013 Sep 9;41(22):10010–10019. doi: 10.1093/nar/gkt791

Table 2.

The MM-GBSA per residue decomposition energies (kcal mol−1)a for the interaction between CPT and the X+1 base at the cleavage site

Decomp. En. CPT_TG CPT_TA CPT_TC CPT_TT
ΔEelec −2.9 −1.5 −0.9 −1.8
ΔEvdw −7.8 −6.9 −5.6 −5.7
ΔGGB 2.2 2.4 1.2 1.5
ΔGnon-polar −0.6 −0.6 −0.5 −0.4
Electrostb −0.7 0.9 0.3 −0.3
Non-polarc −8.4 −7.5 −6.1 −6.1
ΔGtot −9.1 −6.6 −5.8 −6.4

aThe major favorable contributor is highlighted in bold.

bElectrost = ΔEelec + ΔGGB.

cNon-polar = ΔEvdw + ΔGnon-polar.