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. 2013 Sep 5;41(22):10476–10487. doi: 10.1093/nar/gkt799

Table 2.

UV-melting temperatures of SeU-RNAs

Entry Modified region RNA sequences Tm (°C) ΔTm (°C)
1  (5′-rUUAUAUAUAUAUAA-3′)2 38.0 ± 0.3
2 Duplex (5′-rUUA-SeU-AUAUAUAUAA-3′)2 37.3 ± 0.5 −0.7
3  (5′-rGGUAUUGCGGUACC-3′)2 45.0 ± 0.4
4 Duplex (5′-rGG-SeU-AUUGCGGUACC-3′)2 44.2 ± 0.3 −0.8
5      (5′-rCGCGAAUUCGCG-3′)2 39.4 ± 0.4
6 Duplex  (5′-rCGCGAAU-SeU-CGCG-3′)2 39.0 ± 0.3 −0.4
7         5′-AUCACCUCCUUA-3′ 43.2 ± 0.3
        3′-UAGUGGAGGAAU-5′
8 Duplex     5′-A-SeU-CACCUCCUUA-3′ 42.8 ± 0.4 −0.4
    3′-U–A–GUGGAGGAAU-5′
9         (5′-UUAGCUAGCU-3′)2 42.2 ± 0.2
10 Duplex junction     (5′-U-SeU-AGCUAGCU-3′)2 47.1 ± 0.3 +4.9
11         (5′-UUCGCGAUCGCG-3′)2 59.4 ± 0.3
12 Duplex junction     (5′-U-SeU-CGCGAUCGCG-3′)2 63.2 ± 0.3 +3.8
13          5′-UUCAUGUGACC-3′ 48.2 ± 0.3
         3′—–GUACACUGGUU-5′
14 Duplex junction         5′-U-SeU-CAUGUGACC-3′ 49.9 ± 0.4 +1.7
         3′——–GUACACUGGUU-5′