Table 3. Estimated QTL effects from the full model for the number of grains per panicle.
Loci(i, j)a | b | p-valuec | d |
(436_add, 436_add) | 6.79(0.98) | 1.58×10−11 | 0.0846 |
(10_dom, 50_add) | −8.74(1.41) | 1.05×10−9 | 0.0695 |
(875_add, 1156_dom) | 7.15(1.44) | 6.37×10−7 | 0.0427 |
(595_dom, 1004_add) | −12.78(1.88) | 3.34×10−11 | 0.0853 |
(381_dom, 1057_add) | −8.82(1.33) | 9.40×10−11 | 0.0801 |
Parameter(s) | a = 0.05, b = 0.1 | ||
μ | −0.3228 | ||
156.7998 | |||
0.4651 |
aadd: additive effect; dom: dominance effect. If i equals j, then it is a main effect, otherwise, it is an interaction between locus i and locus j. Total number of effects is 5, all with a p-value ≤0.01.
bThe estimated marker effect is denoted by and the standard deviation is denoted by .
c P-value is obtained via t-test.
dPhenotypic variation explained.