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. 2014 Jan 29;9(1):e87330. doi: 10.1371/journal.pone.0087330

Table 5. Estimated QTL effects from the full model for grain weight.

Loci(i, j)a Inline graphic b p-valuec Inline graphic d
(729_add, 729_add) 1.02(0.07) <10−15 0.1548
(37_add, 547_dom) 0.71(0.09) 1.29×10−14 0.0428
(67_add, 772_add) −0.25(0.08) 6.56×10−4 0.0047
(96_add, 1117_dom) 0.21(0.08) 2.95×10−3 0.0035
(119_add, 987_add) 0.18(0.07) 6.73×10−3 0.0024
(151_add, 1262_add) −0.15(0.07) 9.79×10−3 0.0018
(71_dom, 184_add) −0.67(0.09) 1.55×10−13 0.0374
(210_add, 1400_add) 0.19(0.08) 7.79×10−3 0.0025
(329_add, 727_dom) 0.22(0.09) 4.63×10−3 0.0040
(310_dom, 419_add) −0.21(0.05) 1.86×10−5 0.0043
(431_add, 1111_add) 0.35(0.08) 1.01×10−5 0.0107
(71_dom, 500_add) −0.76(0.08) <10−15 0.0493
(583_add, 1578_dom) 0.35(0.08) 9.50×10−6 0.0092
(107_dom, 700_add) 0.19(0.07) 4.80×10−3 0.0035
(708_dom, 714_add) −1.15(0.32) 1.79×10−4 0.0076
(818_add, 1100_add) 0.26(0.08) 3.93×10−4 0.0053
(916_add, 1026_add) 0.15(0.06) 8.50×10−3 0.0019
(472_dom, 920_add) −0.27(0.09) 1.65×10−3 0.0058
(18_dom, 955_add) −0.20(0.08) 3.77×10−3 0.0033
(971_add, 1461_add) 0.27(0.08) 4.75×10−4 0.0075
(620_dom, 1011_add) −0.67(0.09) 3.31×10−12 0.0336
(1035_add, 1224_add) 0.30(0.07) 3.27×10−5 0.0081
(1093_add, 1407_dom) 0.44(0.08) 2.13×10−7 0.0148
(1167_dom, 1168_add) −0.47(0.16) 1.37×10−3 0.0051
(119_dom, 1375_add) 0.61(0.09) 7.83×10−11 0.0289
(1397_add, 1505_add) 0.41(0.09) 1.95×10−6 0.0119
(247_dom, 1505_dom) −0.23(0.08) 1.22×10−3 0.0032
(647_dom, 796_dom) 0.26(0.08) 4.29×10−4 0.0044
Parameter(s) a = 1, b = 1
μ −0.0661
Inline graphic 0.5317
Inline graphic 0.9379

aadd: additive effect; dom: dominance effect. If i equals j, then it is a main effect, otherwise, it is an interaction between locus i and locus j. Total number of effects is 90, only 28 effects with a p-value ≤0.01 are listed in this table.

bThe estimated marker effect is denoted by Inline graphic and the standard deviation is denoted by Inline graphic.

c P-value is obtained via t-test.

dPhenotypic variation explained.