Table 4. QTLs identified in the B73 x IL14H population.
El | Chm | Pos (cM) | LOD | MI Start | MI Stop | R2 | SumR2 | Add.Eff | PT | Co | Nearest marker |
B | 3 | 123.5 | 3.3 | 121.9 | 129.8 | 0.08 | 0.13 | −58.93 | 2.5 | 7 | PZB01457.1 |
B | 5 | 13.3 | 2.5 | 13.3 | 13.3 | 0.05 | 0.13 | −51.74 | 2.5 | 7 | PHM13122.43 |
Cd | 2 | 84.2 | 17.4 | 63.0 | 102.8 | 0.38 | 0.38 | −0.02 | 2.6 | 1 | PZA00495.5 |
Co | 1 | 193.1 | 2.9 | 190.0 | 193.1 | 0.06 | 0.15 | 0.00 | 2.4 | 10 | PZA00235.9 |
Co | 5 | 23.2 | 3.2 | 13.3 | 29.1 | 0.10 | 0.15 | 0.00 | 2.4 | 10 | PZA01925.1 |
Cu | 2 | 94.5 | 4.3 | 88.6 | 100.0 | 0.09 | 0.24 | −0.22 | 2.8 | 10 | PZA01735.1 |
Cu | 4 | 56.6 | 3.1 | 56.0 | 59.9 | 0.06 | 0.24 | −0.20 | 2.8 | 10 | PZA00218.1 |
Cu | 8 | 80.6 | 4.5 | 74.1 | 86.8 | 0.10 | 0.24 | 0.23 | 2.8 | 10 | PZA03698.1 |
K | 4 | 54.9 | 5.0 | 49.7 | 59.9 | 0.15 | 0.15 | −478.96 | 2.7 | 7 | PZA01751.2 |
Mn | 1 | 34.3 | 4.1 | 33.9 | 35.7 | 0.06 | 0.57 | −0.91 | 2.8 | 10 | PZA01030.1 |
Mn | 1 | 89.1 | 14.4 | 73.4 | 106.0 | 0.30 | 0.57 | −1.45 | 2.8 | 10 | PZA02135.2 |
Mn | 3 | 91.8 | 5.1 | 83.6 | 97.9 | 0.10 | 0.57 | 0.91 | 2.8 | 10 | PZA03735.1 |
Mn | 5 | 7.2 | 3.4 | 7.2 | 10.3 | 0.05 | 0.57 | 0.61 | 2.8 | 10 | PZA01438.1 |
Mn | 5 | 40.8 | 3.6 | 34.7 | 49.2 | 0.06 | 0.57 | −0.66 | 2.8 | 10 | PZA01284.6 |
Mo | 1 | 53.9 | 3.0 | 50.6 | 53.9 | 0.05 | 0.33 | −0.01 | 2.8 | 10 | PZA02686.1 |
Mo | 1 | 147.4 | 14.6 | 129.8 | 155.8 | 0.29 | 0.33 | −0.03 | 2.8 | 10 | PZA02269.3.4 |
Na | 5 | 13.3 | 3.0 | 10.3 | 21.2 | 0.06 | 0.14 | −25.24 | 2.5 | 10 | PHM13122.43 |
Na | 5 | 43.7 | 3.7 | 36.8 | 49.2 | 0.08 | 0.14 | 29.13 | 2.5 | 10 | PZA01327.1 |
Ni | 1 | 149.9 | 8.7 | 136.2 | 163.7 | 0.15 | 0.35 | 0.06 | 2.7 | 10 | PZA02269.3.4 |
Ni | 2 | 91.7 | 3.4 | 70.5 | 100.0 | 0.06 | 0.35 | −0.04 | 2.7 | 10 | PZA01735.1 |
Ni | 4 | 56.6 | 3.3 | 56.0 | 59.9 | 0.06 | 0.35 | 0.04 | 2.7 | 10 | PZA00218.1 |
Ni | 5 | 71.2 | 3.6 | 60.7 | 84.6 | 0.08 | 0.35 | 0.04 | 2.7 | 10 | PZA03536.1 |
P | 4 | 53.9 | 4.0 | 52.4 | 56.6 | 0.08 | 0.13 | −191.73 | 2.7 | 10 | PZA01751.2 |
P | 6 | 33.4 | 3.0 | 33.4 | 35.1 | 0.05 | 0.13 | −127.55 | 2.7 | 10 | PZA03461.1 |
Rb | 3 | 119.9 | 2.6 | 118.0 | 121.9 | 0.05 | 0.25 | −0.23 | 2.4 | 10 | PZA02516.1 |
Rb | 4 | 127.1 | 2.6 | 127.1 | 127.1 | 0.05 | 0.25 | 0.24 | 2.4 | 10 | PZA03322.5.3 |
Rb | 5 | 101.2 | 3.0 | 101.2 | 104.5 | 0.05 | 0.25 | −0.27 | 2.4 | 10 | PZA02411.3 |
Rb | 8 | 29.6 | 5.4 | 17.5 | 41.2 | 0.10 | 0.25 | 0.34 | 2.4 | 10 | PZA03178.1 |
S | 1 | 161.7 | 4.1 | 151.9 | 173.5 | 0.09 | 0.09 | −117.13 | 2.5 | 9 | PZA02698.3 |
Zn | 5 | 99.3 | 5.5 | 91.7 | 109.5 | 0.12 | 0.21 | −2.51 | 2.3 | 7 | PZA02411.3 |
Zn | 7 | 132.4 | 3.8 | 123.1 | 132.4 | 0.09 | 0.21 | 2.12 | 2.3 | 7 | PZA01744.1 |
El: Element. Chm: Chromosome. Pos: Position of QTL in cM. LOD: LOD score. MI Start and Stop: the mapping intervals defining where the LOD trace crossed the 95% permutation threshold. R2: the fraction of variance accounted for by the QTL, Sum R2: The cumulative fraction of variance accounted for by all of the QTLs for the element. Add.eff: The additive effect of the QTL in PPM. PT: the 95% permutation threshold from 1000 permutations. CO: number of cofactors used in the model. Nearest Marker: The nearest marker.