Table 3.
Taxonomy and percentage of the bacterial phyla population abundances of the bacterial 16S rRNA gene sequences from orchard soils treated with streptomycin in comparison to those treated with water in descending order of percentage of the population.
| Taxonomy | Lindau apple orchard | Güttingen apple orchard | Wädenswil apple orchard | ||||||
|---|---|---|---|---|---|---|---|---|---|
| FWS4 water % | FWS330 water % | FWS321 strep % | FWS5 water % | FWS339 water % | FWS360 strep % | FWS1 water % | FWS309 water % | FWS312 strep % | |
| Bacteria; Proteobacteria | 39.9 | 43.7 | 42.9 | 39.3 | 39.9 | 38.3 | 41.8 | 36.3 | 37.4 |
| Bacteria; Acidobacteria | 21.9 | 22.5 | 26.8 | 22.2 | 19.9 | 24.8 | 22.0 | 23.4 | 19.8 |
| Bacteria; Verrucomicrobia | 10.6 | 9.6 | 8.1 | 13.7 | 13.7 | 10.2 | 6.8 | 12.6 | 11.2 |
| Bacteria; Actinobacteria | 8.8 | 8.9 | 6.1 | 6.9 | 7.6 | 5.4 | 9.0 | 5.6 | 10.0 |
| Bacteria; Bacteroidetes | 4.8 | 4.2 | 4.9 | 5.2 | 7.8 | 5.2 | 4.1 | 4.6 | 4.7 |
| Bacteria; Gemmatimonadetes | 3.3 | 4.2 | 3.8 | 2.8 | 2.7 | 3.0 | 2.3 | 3.0 | 2.8 |
| Bacteria; Planctomycetes | 2.6 | 0.9 | 1.1 | 2.5 | 2.4 | 4.5 | 2.6 | 4.6 | 3.8 |
| Bacteria; WS3 | 1.7 | 0.6 | 0.0 | 2.3 | 1.1 | 2.3 | 2.7 | 3.0 | 2.9 |
| Bacteria; Firmicutes | 1.5 | 1.0 | 1.4 | 1.4 | 0.5 | 0.6 | 2.4 | 1.2 | 1.3 |
| Bacteria; Nitrospirae | 1.3 | 1.0 | 0.5 | 1.0 | 1.2 | 1.1 | 1.9 | 2.6 | 2.1 |
| Bacteria; Chloroflexi | 1.0 | 1.1 | 0.7 | 0.7 | 1.3 | 0.9 | 1.7 | 0.6 | 1.0 |
| Bacteria; Other | 1.2 | 0.7 | 0.9 | 1.1 | 0.9 | 1.6 | 1.4 | 1.4 | 1.4 |
| Archaea; Crenarchaeota | 0.4 | 0.5 | 0.3 | 0.2 | 0.2 | 1.6 | 0.4 | 0.4 | 0.3 |
| Bacteria; WPS-2 | 0.2 | 0.4 | 0.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| Bacteria; Armatimonadetes | 0.1 | 0.1 | 0.5 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| Bacteria; Chlamydiae | 0.1 | 0.1 | 0.3 | 0.2 | 0.1 | 0.0 | 0.3 | 0.0 | 0.0 |
| Bacteria; Elusimicrobia | 0.2 | 0.1 | 0.3 | 0.1 | 0.2 | 0.2 | 0.1 | 0.2 | 0.4 |
| Bacteria; Chlorobi | 0.2 | 0.1 | 0.1 | 0.0 | 0.2 | 0.2 | 0.3 | 0.2 | 0.3 |
| Bacteria; Cyanobacteria | 0.2 | 0.2 | 0.1 | 0.3 | 0.2 | 0.0 | 0.2 | 0.0 | 0.1 |
| Bacteria; FCPU426 | 0.1 | 0.0 | 0.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1 | 0.0 |
| Bacteria; TM6 | 0.1 | 0.0 | 0.1 | 0.1 | 0.0 | 0.0 | 0.0 | 0.1 | 0.1 |
| Unclassified; Other | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| Bacteria; AD3 | 0.0 | 0.0 | 0.1 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
Strep, streptomycin treated orchard; Water, water treated orchard.