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. 2013 Dec 11;289(5):3055–3065. doi: 10.1074/jbc.M113.531053

TABLE 1.

Structural statistics for the solution structure of TePixJ GAF domain as Pb

Restraints and structural statistics r.m.s.d.
〈Saa Lowest energy
Experimental 1H-1H distance restraints
    GAF domain (Å) (2847)
        Intraresidue (1017) 0.091 ± 0.003 0.090
        Sequential |ij| = 1 (772) 0.063 ± 0.004 0.058
        Short range 1 < |ij| ≤ 5 (575) 0.123 ± 0.015 0.125
        Long range |ij| > 5 (483) 0.242 ± 0.026 0.239
    PVB (Å) (163)
        Intraresidue (67) 0.295 ± 0.003 0.295
        Sequential |ij| = 1 (26) 0.031 ± 0.022 0.040
        Short range 1 < |ij| ≤ 5 (38) 0.420 ± 0.019 0.392
        Long range |ij| > 5 (32) 0.436 ± 0.091 0.603

Hydrogen bonds (Å) (136) 0.095 ± 0.007 0.087

Predicted dihedral restraints (°) (294)
    ϕ (147) / ψ (147) 2.02 ± 0.50 1.95

Residual dipolar couplings (Hz) (217)
    1DNH Pf1 (128) Rb = 18.2% 1.43 ± 0.03 1.44
    1DCαHα Pf1 (89) Rc = 31.2% 2.50 ± 0.04 2.56

Deviations from idealized covalent geometry
    Bonds (Å) (2738) 0.0014 ± 0.0001 0.0014
    Angles (°) (4946) 0.398 ± 0.001 0.402
    Impropers (°) (1498) 0.85 ± 0.02 0.86

Coordinate precisiond
    Backbone (N, Cα, C') 0.20 ± 0.04 0.16
    All non-hydrogen atoms 0.62 ± 0.04 0.58

a 〈Sa〉 represents the 10 lowest-energy structures. For 〈Sa〉, each value represents the mean± S.D. with the number of restraints used to calculate these values shown in parentheses.

b R factor is defined as in XPLOR-NIH (28).

c R and r.m.s.d. of CαHα RDCs are scaled to NH.

d Average r.m.s.d. of the 10 lowest energy structures from the mean coordinates for structured residues 12–50, 72–83 and 94–148.