Table 1. Bacterial strains used in this study.
Strains | Relevant characteristicsa | Reference/Source |
E. coli | ||
DH5a | Cloning strain, Nalr | [72] |
PRK2013 | Helper strain for tri-parental conjugation, Kmr | [77] |
E. coli (pSB401) | Biosensor strain; Tcr | [70], [73] |
Biosensors | ||
A. tumefaciens NT1 | Harbouring pZLR4 plasmid, β-galactosidase reporter system, Gmr | [95] |
C. violaceum CV026 | Violacin pigment reporter system, Kmr | [79] |
Pseudomonas syringae pv. actinidiae ( Psa ) | ||
Psa 10,22 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 10,24 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 10,25 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 10,29 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 10,30 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 11,41 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 11,47 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 11,50 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 11,51 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 12,56 | Wild type; Italian isolate; Nfr | Lab collection |
Psa 12,64 | Wild type; Italian isolate; Nfr | Lab collection |
Psa-mR1 | psaR1::pKNOCK; Nfr, Kmr; derivative of wild type | This work |
Psa-mR2 | psaR2::pKNOCK; Nfr, Kmr; derivative of wild type | This work |
Psa-mR3 | psaR3:: in-frame deletion mutant generated by pEX19Gm plasmid; Nfr;derivative of wild type | This work |
Psa-mR1+pBBR-psaR1 | Psa-mR1 carrying full length psaR1 in pBBR; Nfr, Kmr, Gmr; derivative of Psa-mR1 | This work |
Psa-mR2+pBBR-psaR2 | Psa-mR2 carrying full length psaR2 in pBBR; Nfr, Kmr, Gmr; derivative of Psa-mR2 | This work |
Psa-mR3+pBBR-psaR3 | Psa-mR3 carrying full length psaR3 in pBBR; Nfr, Gmr, derivative of Psa-mR3 | This work |
Psa-mR3+pcos-psaR3 | Psa-mR3 carrying cosmid clone for psaR3; Nfr, Tcr, derivative of Psa-mR3 | This work |
Psa-mR3+ Psa-mR1 | Psa-mR3 and Psa-mR1 double mutant; Nfr, Kmr; derivative of Psa-mR3 | This work |
Psa-mR3+ Psa-mR2 | Psa-mR3 and Psa-mR2 double mutant; Nfr, Kmr; derivative of Psa-mR3 | This work |
Psa-mR3+ Psa-mR1+ pcos-psaR3+pBBR-psaR1 | Psa-mR3 and Psa-mR1 double mutant carrying cosmid clone for psaR3 and fulllength psaR1 in pBBR; Nfr, Kmr, Tcr, Gmr; derivative of Psa-mR3+ Psa-mR1 | This work |
Psa-mR3+ Psa-mR2+ pcos-psaR3+pBBR-psaR2 | Psa-mR3 and Psa-mR2 double mutant carrying cosmid clone for psaR3 and fulllength psaR2 in pBBR; Nfr, Kmr, Tcr, Gmr; derivative of Psa-mR3+ Psa-mR2 | This work |
Nalr, Kmr, Tcr, Gmr, and Nfr indicate resistance to nalidixic acid, kanamycin, tetracycline, gentamycin and nitrofurantoin respectively.