Table 2.
SSR locus | Allelic range (bp) | Total alleles | Number of genotypes | H obs | H exp | Number of fixed alleles | Fixed alleles | Cultivarsa with the fixed allele |
---|---|---|---|---|---|---|---|---|
mPdCIR 10 | 138–176 | 6 | 13 | 0.41 | 0.46 | 1 | 154 | A, Be, D, Hal, O, S, Tag, Tam |
mPdCIR 15 | 142–157 | 5 | 15 | 0.87 | 0.77 | 2 | 142 | Tag |
157 | Z | |||||||
mPdCIR 25 | 219–257 | 6 | 17 | 0.90 | 0.76 | 1 | 249 | Be |
mPdCIR 32 | 306–321 | 5 | 13 | 0.71 | 0.66 | 2 | 316 | S, Z |
309 | Tal | |||||||
mPdCIR 70 | 205–227 | 9 | 32 | 0.91 | 0.83 | 1 | 213 | D |
mPdCIR 78 | 126–173 | 11 | 36 | 0.85 | 0.85 | 2 | 136 | Tag |
153 | S | |||||||
mPdCIR 85 | 175–199 | 8 | 39 | 0.83 | 0.85 | 2 | 175 | O |
181 | Hal | |||||||
mPdCIR 93 | 181–197 | 7 | 17 | 0.77 | 0.77 | 1 | 197 | O |
PDCAT 1 | 103–123 | 4 | 10 | 0.23 | 0.63 | 4 | 103 | Tam, Z |
105 | Bes, S | |||||||
119 | A, D, Hal, S | |||||||
123 | Tal | |||||||
PDCAT 2 | 186–209 | 7 | 20 | 0.85 | 0.79 | 2 |
186 206 |
Z |
Bes | ||||||||
PDCAT 6 | 142–172 | 7 | 17 | 0.82 | 0.71 | 2 | 150 | Z |
158 | O | |||||||
PDCAT 8 | 222–258 | 6 | 14 | 0.78 | 0.68 | 2 | 246 | S |
252 | Tal | |||||||
PDCAT 11 | 154–177 | 6 | 20 | 0.75 | 0.79 | 2 | 154 | Z |
159 | S | |||||||
PDCAT 14 | 141–163 | 9 | 20 | 0.42 | 0.63 | 1 | 155 | D, Hal, O, Tag, Tal, Tam |
PDCAT 17 | 131–157 | 6 | 14 | 0.45 | 0.63 | 3 | 141 | S |
147 | A, D, K, N, O | |||||||
157 | Tal | |||||||
PDCAT 18 | 123–149 | 8 | 29 | 0.88 | 0.77 | 0 | 0 | |
Total | 110 | 28 |
Hobs observed heterozygosity by locus, Hexp expected heterozygosity at the HW equilibrium
aA Abel, Ba Bamour, Ber Berni, Bes Bestian, D Deglet, Hal Halima, Ham Hamria, K Kathari, N Noyat Meka, O Omglaib, S Saiedi, Sa Saila, So Sokeri, Tag Tagiat, Tal Talis, Tam Tameg, Tas Tasferit, Z Zebur