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. 2014 Feb 3;5:30. doi: 10.3389/fmicb.2014.00030

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Copyright © 2014 Yoshida, Iguchi, Yurimoto, Murakami and Sakai.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Neighbor-joining tree of methanotrophic phylotypes detected in the aquatic plants based on the deduced amino acid sequences of pmoA genes. Sequence of amoA of Nitrosococcus oceani was used as an outgroup to root the tree. H' values are Shannon diversity indices (Shannon and Weaver, 1948). Bootstrap values (>60%) obtained from 1000 resamplings are shown. Accession numbers for the sequences are AAC25091, ACN73467, ACN73466, AAA87220, AAF08211, AAB49821, AAC04380, BAL04120, ABD13901, YP 004915812, BAJ17641, AAA87218, AAG13081.