Table 3. Genome statistics.
| Attribute | Value | % of Total |
|---|---|---|
| Genome size (bp) | 6,237,577 | 100 |
| DNA coding region(bp) | 5,499,388 | 88.2 |
| DNA G+C content (bp) | 3612173 | 57.9 |
| DNA scaffolds | 1 | 100 |
| Total genes | 4,960 | 100 |
| Protein coding genes | 4,907 | 98.9 |
| RNA genes | 53 | 1.3 |
| Pseudo genes | 90 | 1.8 |
| Genes in internal clusters | 2,679 | 54 |
| Genes with function prediction | 3,511 | 70.8 |
| Genes assigned to COGs | 3,496 | 70.5 |
| Genes with Pfam domains | 3,754 | 75.7 |
| Genes with signal peptides | 797 | 16.1 |
| Genes with transmembrane helices | 1,291 | 26.0 |
| CRISPR repeats | 0 | - |
The total is based on either the size of the genome in base pairs or the protein coding genes in the annotated genome.