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. 2014 Jan;58(1):196–200. doi: 10.1128/AAC.01171-13

TABLE 1.

Primers and profiles used for PCR amplification of the pvdhfr and pvdhps genes

Gene Primer name Primer sequence (5′–3′) Mg+2 concn (mM) PCR program
Denaturation
Annealing
Elongation
No. of cycles
Temp (°C) Time (min) Temp (°C) Time (min) Temp (°C) Time (min) 1st PCR 2nd PCR
pvdhfr VDT-OF ATGGAGGACCTTTCAGATGTATTTGACATT 2 94 1 60 2 72 2 25
VDT-OR GGCGGCCATCTCCATGGTTATTTTATCGTG
VDT-OF ATGGAGGACCTTTCAGATGTATTTGACATT 94 1 62 2 72 2 30
VDF-NR TCACACGGGTAGGCGCCGTTGATCCTCGTG
pvdhps PVDHPS-OF ATTCCAGAGTATAAGCACAGCACATTTGAG 3 94 2 60 2 72 1 25
PVDHPS-OR CTAAGGTTG ATGTATCCTTGTGAGCACATC
PVDHPS-NF AATGGCAAGTGATGGGGCGAGCGTGATTGA 94 2 52 2 72 1 30
PVDHPS-NR CAGTCTGCACTCCCCGATGGCCGCGCCACC