TABLE 1.
Gene | Primer name | Primer sequence (5′–3′) | Mg+2 concn (mM) | PCR program |
|||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Denaturation |
Annealing |
Elongation |
No. of cycles |
||||||||
Temp (°C) | Time (min) | Temp (°C) | Time (min) | Temp (°C) | Time (min) | 1st PCR | 2nd PCR | ||||
pvdhfr | VDT-OF | ATGGAGGACCTTTCAGATGTATTTGACATT | 2 | 94 | 1 | 60 | 2 | 72 | 2 | 25 | |
VDT-OR | GGCGGCCATCTCCATGGTTATTTTATCGTG | ||||||||||
VDT-OF | ATGGAGGACCTTTCAGATGTATTTGACATT | 94 | 1 | 62 | 2 | 72 | 2 | 30 | |||
VDF-NR | TCACACGGGTAGGCGCCGTTGATCCTCGTG | ||||||||||
pvdhps | PVDHPS-OF | ATTCCAGAGTATAAGCACAGCACATTTGAG | 3 | 94 | 2 | 60 | 2 | 72 | 1 | 25 | |
PVDHPS-OR | CTAAGGTTG ATGTATCCTTGTGAGCACATC | ||||||||||
PVDHPS-NF | AATGGCAAGTGATGGGGCGAGCGTGATTGA | 94 | 2 | 52 | 2 | 72 | 1 | 30 | |||
PVDHPS-NR | CAGTCTGCACTCCCCGATGGCCGCGCCACC |