TABLE 1.
Primer and parameter | 0 h | 2 h | 48 h | 72 h | 120 h | Total | Mean | SD |
---|---|---|---|---|---|---|---|---|
MTP | ||||||||
Total reads obtained | 25,344,501 | 28,901,469 | 24,546,749 | 26,620,329 | 28,459,085 | 133,872,133 | 26,774,426.6 | 1,896,929.4 |
Mapping to the genome | 19,928,814 | 22,686,873 | 19,744,776 | 22,007,918 | 22,641,520 | 107,009,901 | 21,401,980.2 | 1,455,258.9 |
Mapping multiple places | 2,371,545 | 3,274,722 | 1,750,275 | 2,471,673 | 1,600,175 | 11,468,390 | 2,293,678.0 | 666,413.2 |
Mapping ambiguous places | 66,261 | 137,707 | 58,289 | 68,038 | 68,013 | 398,308 | 79,661.6 | 32,697.2 |
Mapping genes | 17,085,018 | 19,614,422 | 17,510,480 | 19,610,346 | 20,252,575 | 94,072,841 | 18,814,568.2 | 1,417,117.0 |
N6 | ||||||||
Total reads obtained | 24,356,818 | 31,576,781 | 27,550,897 | 30,029,099 | 32,760,914 | 146,274,509 | 29,254,901.8 | 3,360,709.9 |
Mapping to the genome | 21,255,501 | 28,240,311 | 22,079,771 | 25,602,909 | 29,028,130 | 126,206,622 | 25,241,324.4 | 3,512,362.8 |
Mapping multiple places | 1,043,153 | 938,159 | 1,280,859 | 1,751,283 | 1,095,907 | 6,109,361 | 1,221,872.2 | 320,958.0 |
Mapping ambiguous places | 90,894 | 175,281 | 85,084 | 89,449 | 101,099 | 541,807 | 108,361.4 | 37,866.9 |
Mapping genes | 17,441,060 | 24,592,393 | 17,694,474 | 20,588,254 | 24,579,478 | 104,895,659 | 2,097,9131.8 | 3,517,025.2 |