TABLE 2.
Genes associated with robustness against heat and oxidative stress resulting from the genotype-phenotype comparison
| Locus(i)a | Gene | Product | Presence of gene in robust phenotype |
|---|---|---|---|
| Heat stress | |||
| LACR_1479 (LLKF_1446) | Hypothetical protein | Absent | |
| LLKF_1440 (LACR_1472) | GntR family transcriptional regulator | Absent | |
| L183932 | yliD | Hypothetical protein | Present |
| LLKF_1406 (llmg_1137, LACR_1439, L149891) | mtsC | Manganese ABC transporter permease | Present |
| LLKF_1445 (LACR_1478) | Sugar ABC transporter | Absent | |
| LACR_1475 (LLKF_1442) | Hypothetical protein | Absent | |
| LLKF_1441 (LACR_1473) | Beta-glucosidase | Absent | |
| L66209 | ymgH | Hypothetical protein | Present |
| LLKF_0011 (L15262) | yabE | ABC transporter ATP-binding protein | Present |
| LACR_1477 (LLKF_1444) | Sugar ABC transporter permease | Absent | |
| Oxidative stress | |||
| L31294 (LLKF_0836) | yidB | Cellobiose-specific PTS IIC component | Present |
| LACR_0155 | Hypothetical protein | Absent | |
| LACR_1321 | Hypothetical protein | Absent | |
| llmg_1634 (LACR_0981) | ABC transporter permease | Absent | |
| LACR_0651 | Surface antigen | Absent | |
| LACR_1297 | Saccharopine dehydrogenase-related protein | Absent | |
| LACR_1259 | Hypothetical protein | Absent | |
| LACR_0861 | Hypothetical protein | Absent | |
| LACR_1215 | Type I restriction-modification system methyltransferase subunit | Absent | |
| LACR_1347 | Transcriptional regulator | Absent | |
| LACR_1992 | Hypothetical protein | Absent | |
| LACR_2213 | Hypothetical protein | Absent | |
| LACR_2214 | Hypothetical protein | Absent | |
| LACR_0503 | Hypothetical protein | Absent | |
| LACR_0994 | Lipopolysaccharide biosynthesis glycosyltransferase | Absent | |
| LACR_0995 | Lipopolysaccharide biosynthesis glycosyltransferase | Absent | |
| LACR_1262 | Hypothetical protein | Absent | |
| LACR_1322 | Hypothetical protein | Absent | |
| LACR_1393 | Hypothetical protein | Absent | |
| LACR_0354 | Molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein | Absent | |
| LACR_1164 | Hypothetical protein | Absent | |
| LACR_1257 | Glycosyltransferase | Absent | |
| LACR_1261 | Hypothetical protein | Absent | |
| LACR_1963 | Hypothetical protein | Absent | |
| LACR_2216 | Hypothetical protein | Absent | |
| LACR_2218 | Hypothetical protein | Absent | |
| LACR_2480 | Hypothetical protein | Absent | |
| LACR_1318 | Hypothetical protein | Absent | |
| LACR_1319 | ADP-ribose pyrophosphatase | Absent | |
| LACR_1348 | Arabinose efflux permease | Absent | |
| LACR_1930 | Hypothetical protein | Absent | |
| LACR_0803 | Hypothetical protein | Absent | |
| LACR_1260 | Hypothetical protein | Absent | |
| LACR_2551 | XRE family transcriptional regulator | Absent | |
| LACR_2447 | LacI family transcription regulator | Absent | |
| LACR_0292 | Hypothetical protein | Absent | |
| LACR_1300 | Hypothetical protein | Absent | |
| LACR_2549 | Serine/threonine protein kinase | Absent | |
| LLKF_0831 (L0206, llmg_1744) | ftsY | Signal recognition particle docking protein FtsY | Present |
| LACR_0846 | Hypothetical protein | Absent | |
| LACR_1296 | Putative intracellular protease/amidase | Absent | |
| LACR_1931 | Hypothetical protein | Absent | |
| LACR_2086 | Glycosyltransferase | Absent | |
| LACR_0154 | Cell surface protein | Absent | |
| LACR_1038 | Hypothetical protein | Absent | |
| LACR_1264 | Hypothetical protein | Absent | |
| LACR_1388 | Hypothetical protein | Absent | |
| LACR_2121 (llmg_0814) | ps323 | Hypothetical protein | Absent |
| LACR_0157 | XRE family transcriptional regulator | Absent | |
| LACR_1834 (LLKF_1826) | yrbH | Hypothetical protein | Absent |
| LLKF_2283 (llmg_1258, L66407) | ymgI | Hypothetical protein | Present |
| llmg_1259 (LLKF_0279, LLKF_2282) | ymgH | Hypothetical protein | Present |
a
Loci with prefixes of LACR, LLKF, llmg, and L represent strains SK11, KF147, MG1363, and IL1403, respectively.