TABLE 2.
L. buchneri CRISPR spacer matches
| Strain | Spacer no. | Sequence |
No. of nt matches in spacer (among 30 nt) | Protospacer match (accession no.) | Annotation | ||
|---|---|---|---|---|---|---|---|
| Left flank | Protospacer | Right flank | |||||
| LA 1175 | 15 | AAAATTCAGA | CAACAAAAAAAGCGCTCCGCAACGGCCATT | GCAAAACGCT | 30 | Food metagenome (ASXE01000335) | Putative phage Mu Gam protein |
| LA 1154 | 12 | ATGAAGTTCA | AGCTGTGTCAAACTACGTTGAATCCCAAGG | ACAAAACTTA | 29 | Food metagenome (ASXE01000117) | Putative phage transcriptional activator |
| LA 1152 | 2 | CTGGTTTTAT | AAACGGATATTGCGGCTTATATTAACGAGC | TGAAATGGTT | 30 | Lactobacillus brevis/pLB925A02 | Plasmid mobilization protein |
| LA 1152 | 2 | CTGGTTTTAT | AAACGGATATTGCGGCTTATATTAACGAGC | TGAAATGGTT | 30 | Lactobacillus buchneri CD034/pCD034-1 | Mobilization protein |
| LA 1147 | 10 | AGAATATCGA | CAACGCAGCTAAAGATAATCGTCAGAATTA | CCAGAAATTA | 29 | Food metagenome (ASXE01000848) | Putative phage nucleotide-binding protein |
| NRRL B-30929 | 9 | TAAGCTTGGT | GGAAAAAGGTGGCGGCCGCTTTGTGCAAGG | TCAAGAAATG | 30 | Lactobacillus kefiranofaciens ZW3/pWW2 | Conjugal transfer protein |
| NRRL B-30929 | 3 | TTACGCTTTA | ACCGAGTTTCGTGATCTCAAAAGTAGCTAC | GCAAAAACTA | 30 | Lactobacillus paracasei/pLP5402 | Plasmid replication initiation |
| LA 1188 | 1 | TTCTTAGATG | CCGCTTACTTGCCGTTAAAGCGGGATATCG | TTCAAAAAGA | 28 | Lactobacillus plantarum ZJ316/pLP-ZJ103 | Transposase |
| LA 1161 | 21 | AAAATTCAGA | CAACAAAAAAAGCGCTCCGCAACGGCCATT | GCAAAACGCT | 30 | Food metagenome (ASXE01000848) | Putative phage nucleotide-binding protein |
| LA 1161 | 23 | CATTATGCTA | AAGGTTCAGGTGTCTCACACGCTGAACTAG | ACAAAATTAT | 29 | Lactobacillus kisonensis F0435 | Phage tail tape measure protein |
| LA 1161 | 24 | CTTTATCTAG | GAAATAAGCAGCCTCATTTGAAGCACCATG | CCAAAAATGA | 30 | Food metagenome (ASXE01000470) | Putative phage lysozyme |