TABLE 2.
PA14 locus no. | Gene namea | Fold change in gene expression in: |
Product namec | |
---|---|---|---|---|
PA14 ΔsigX::Gmr vs WT PA14b | PA14(pJN105sigX) vs PA14(pJN105) | |||
PA14_00060 | −2.5 | 8.8 | Putative acyltransferase | |
PA14_00480 | −2.3 | 15.0 | Conserved hypothetical protein | |
PA14_05530 | mexA | −2.1 | 4.1 | RND multidrug efflux membrane fusion protein MexA precursor |
PA14_05550 | oprM | −2.1 | 3.4 | Major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor |
PA14_08560 | tyrZ | −2.3 | 4.5 | Tyrosyl-tRNA synthetase 2 |
PA14_09400 | phzS | −13.3 | 3.0 | Flavin-containing monooxygenase |
PA14_17220 | lpxB | −2.2 | 3.1 | Lipid A disaccharide synthase |
PA14_17270 | accA | −2.9 | 5.8 | Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit |
PA14_20750 | −2.2 | 2.1 | Putative chemotaxis signal transduction protein | |
PA14_25650 | fabD | −6.0 | 13.0 | Malonyl- CoA-[acyl carrier protein] transacylase |
PA14_25660 | fabG | −3.1 | 8.7 | 3-Oxoacyl-[acyl carrier protein] reductase |
PA14_25670 | acpP | −2.1 | 4.8 | Acyl carrier protein |
PA14_25900 | -3.4 | 14.4 | Putative short-chain alcohol dehydrogenase | |
PA14_40560 | −8.2 | 19.2 | Conserved hypothetical protein | |
PA14_41575 | sigX | −50.7 | 19.0 | ECF sigma factor SigX |
PA14_41590 | cmpX* | −4.2 | 5.2 | Putative cytoplasmic membrane protein |
PA14_42310 | pscF | −5.3 | 6.7 | Type III export protein PscF |
PA14_42350 | pscC | −5.3 | 10.2 | Type III secretion outer membrane protein PscC precursor |
PA14_42380 | exsD* | −3.8 | 5.7 | Conserved hypothetical protein |
PA14_42400 | exsB | −11.9 | 10.1 | Exoenzyme S synthesis protein B |
PA14_42430 | exsC | −4.0 | 6.6 | Exoenzyme S synthesis protein C precursor |
PA14_42440 | popD | −7.2 | 2.2 | Translocator outer membrane protein PopD precursor |
PA14_43690 | fabB | −3.1 | 8.6 | Beta-ketoacyl-ACP synthase I |
PA14_49160 | yegE* | −4.0 | 12.8 | Conserved hypothetical protein |
PA14_64110 | accC | −3.0 | 7.3 | Biotin carboxylase |
PA14_68360 | −7.2 | 6.0 | Putative beta-ketoacyl synthase |
An alternative gene name was provided (indicated by the asterisk) when no gene name was annotated.
WT, wild-type.
CoA, coenzyme A.