TABLE 1.
Coverage of predicted tryptic peptides for VSV strain Indiana protein P
Ending amino acid | Sequencea | Length (amino acids) | Avg mass (Da) | Scan count |
---|---|---|---|---|
6 | MDNLTK | 6 | 720.84 | 0 |
8 | VR | 2 | 273.34 | 0 |
12 | EYLK | 4 | 551.64 | 0 |
16 | SYSR | 4 | 511.54 | 0 |
31 | SYSRLDQAVGEIDEIEAQR | 19 | 2,259.33 | 9 |
31 | LDQAVGEIDEIEAQR | 15 | 1,685.81 | 126 |
34 | LDQAVGEIDEIEAQREAK | 18 | 2,014.20 | 41 |
34 | AEK | 3 | 346.38 | 0 |
109 | SNYELFQEDGVEEHTRPSYFQAADDSDTESEPEIEDNQGLYVPDPEAEQVEGFIQGPLDDYADEDVDVVFTSDWK | 75 | 8,563.86 | 0 |
120 | QPELESDEHGK | 11 | 1,268.30 | 7 |
123 | TLR | 3 | 388.47 | 0 |
135 | LTLPEGLSGEQK | 12 | 1,271.43 | 61 |
143 | LTLPEGLSGEQKSQWLLTIK | 20 | 2,241.64 | 3 |
143 | SQWLLTIK | 8 | 988.20 | 50 |
150 | AVVQSAK | 7 | 701.82 | 0 |
169 | HWNLAECTFEASGEGVIIK | 19 | 2,104.37 | 52 |
170 | K | 1 | 146.19 | 0 |
171 | R | 1 | 174.20 | 0 |
171 | RQITPDVYK | 9 | 1,119.30 | 11 |
179 | QITPDVYK | 8 | 963.10 | 11 |
202 | VTPVMNTHPYQSEAVSDVWSLSK | 23 | 2,575.88 | 208 |
210 | TSMTFQPK | 8 | 939.09 | 36 |
211 | TSMTFQPKK | 9 | 1,067.29 | 3 |
211 | K | 1 | 146.19 | 0 |
228 | KASLQPLTISLDELFSSR | 18 | 2,005.32 | 46 |
228 | ASLQPLTISLDELFSSR | 17 | 1,877.13 | 19 |
239 | ASLQPLTISLDELFSSRGEFISVGGNGR | 28 | 2,951.31 | 2 |
239 | GEFISVGGNGR | 11 | 1,092.18 | 46 |
243 | MSHK | 4 | 501.60 | 0 |
251 | MSHKEAILLGLR | 12 | 1,367.69 | 10 |
251 | EAILLGLR | 8 | 884.09 | 36 |
253 | YK | 2 | 309.37 | 0 |
254 | K | 1 | 146.19 | 0 |
260 | KLYNQAR | 7 | 892.04 | 11 |
260 | LYNQAR | 6 | 763.85 | 14 |
262 | VK | 2 | 245.32 | 0 |
Boldface type indicates an amino acid in the peptide sequence that is likely to be positively charged during mass spectral acquisition.