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. 2014 Feb;88(3):1461–1472. doi: 10.1128/JVI.02384-13

TABLE 1.

Coverage of predicted tryptic peptides for VSV strain Indiana protein P

Ending amino acid Sequencea Length (amino acids) Avg mass (Da) Scan count
6 MDNLTK 6 720.84 0
8 VR 2 273.34 0
12 EYLK 4 551.64 0
16 SYSR 4 511.54 0
31 SYSRLDQAVGEIDEIEAQR 19 2,259.33 9
31 LDQAVGEIDEIEAQR 15 1,685.81 126
34 LDQAVGEIDEIEAQREAK 18 2,014.20 41
34 AEK 3 346.38 0
109 SNYELFQEDGVEEHTRPSYFQAADDSDTESEPEIEDNQGLYVPDPEAEQVEGFIQGPLDDYADEDVDVVFTSDWK 75 8,563.86 0
120 QPELESDEHGK 11 1,268.30 7
123 TLR 3 388.47 0
135 LTLPEGLSGEQK 12 1,271.43 61
143 LTLPEGLSGEQKSQWLLTIK 20 2,241.64 3
143 SQWLLTIK 8 988.20 50
150 AVVQSAK 7 701.82 0
169 HWNLAECTFEASGEGVIIK 19 2,104.37 52
170 K 1 146.19 0
171 R 1 174.20 0
171 RQITPDVYK 9 1,119.30 11
179 QITPDVYK 8 963.10 11
202 VTPVMNTHPYQSEAVSDVWSLSK 23 2,575.88 208
210 TSMTFQPK 8 939.09 36
211 TSMTFQPKK 9 1,067.29 3
211 K 1 146.19 0
228 KASLQPLTISLDELFSSR 18 2,005.32 46
228 ASLQPLTISLDELFSSR 17 1,877.13 19
239 ASLQPLTISLDELFSSRGEFISVGGNGR 28 2,951.31 2
239 GEFISVGGNGR 11 1,092.18 46
243 MSHK 4 501.60 0
251 MSHKEAILLGLR 12 1,367.69 10
251 EAILLGLR 8 884.09 36
253 YK 2 309.37 0
254 K 1 146.19 0
260 KLYNQAR 7 892.04 11
260 LYNQAR 6 763.85 14
262 VK 2 245.32 0
a

Boldface type indicates an amino acid in the peptide sequence that is likely to be positively charged during mass spectral acquisition.