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. 2014 Feb 3;9(2):e88068. doi: 10.1371/journal.pone.0088068

Table 2. Selected functionally classified and differentially expressed genes in the sd37 mutant compared with the 3037 (wild type) as revealed by microarray analysis.

Gene Description and functional categories Fold change (sd37/3037)
Microarray qPCR
cell division
LOC_Os06g08790 origin recognition complex subunit, OsORC1 −1.72 −1.37
LOC_Os05g39850 DNA replication licensing factor MCM3 −3.33 −1.94
LOC_Os01g59120 B-type cyclins, OsCycB1 −2.08 −1.59
LOC_Os07g42860 D-type cyclins, OsCycD2 −3.85 −1.26
LOC_Os06g47310 cyclin-dependent cdc2 protein −3.33 −2.38
LOC_Os02g06380 cyclin-dependent cdc3 protein −2.44 −2.27
LOC_Os02g58220 replication protein A 32 kDa subunit 1.84 1.50
LOC_Os10g40720 beta-expansin 3 1.55 2.10
lipid metabolism
LOC_Os03g03370 fatty acid hydroxylase −1.72 −1.39
LOC_Os08g27040 lipid phosphatase protein −1.52 −1.85
LOC_Os04g21160 gastric triacylglycerol lipase precursor 8.47
LOC_Os08g20544 calcium lipid binding protein-like 1.72 2.13
LOC_Os01g22560 glycerol-3-phosphate acyltransferase 1 3.86
cytoskeleton
LOC_Os12g42160 kinesin motor domain containing protein −8.33 −12.54
LOC_Os05g46030 myosin head family protein., OsMyoXIH 1.53 1.20
LOC_Os06g29350 myosin head family protein, OsMyoXIJ −2.63 −1.55
LOC_Os08g34390 fibroin heavy chain precursor −14.29 −12.54
LOC_Os10g31720 glycine-rich cell wall structural protein 2 precursor −14.29 −13.15
cytochrome P450
LOC_Os03g30420 cytochrome P450 78A11 −8.33 −4.16
LOC_Os12g09790 cytochrome P450 76B1 −4.17
LOC_Os01g36294 cytochrome P450 71C4 2.05 1.89
LOC_Os07g19160 Cytochrome P450 −4.35
Gibberellin related
LOC_Os07g01340 OsGA2ox5 −1.67 −1.50
LOC_Os02g41954 OsGA2ox7 −4.16 −3.20
cytokinin related
LOC_Os07g30620 cytokinin-O-glucosyltransferase 2, 2.05 2.14
LOC_Os07g30330 cytokinin-O-glucosyltransferase 2 1.95 2.35