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. 2014 Feb 4;8:6. doi: 10.3389/fninf.2014.00006

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Copyright © 2014 Stimberg, Goodman, Benichoux and Brette.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Examples for neuronal model descriptions in Brian2. (A) Differential equations and parameters are defined via multi-line strings, units are specified after the colon. Note that the units specify the units of the variables defined in the respective line which in the case of differential equations is not equivalent to the units of left-hand side and right-hand side of the equations (volt vs. volt/second). (B) The symbol xi is used to refer to a stochastic variable for defining stochastic equations. (C,D) Threshold conditions and reset statements are also defined by strings.