Table 1.
Expressed genes in all the samples
| Genotype | N condition | Tissue | % of total paired reads | # genes (FGS) >0 FPKM (% difference under N limitation) | # genes (FGS) >1 FPKM (% difference under N limitation) | # genes (FGS) >5 FPKM (% difference under N limitation) |
|---|---|---|---|---|---|---|
| SRG100 |
Limiting |
Leaf |
75.97 |
28048 (−3.2) |
18783 (5.9) |
11543 (15) |
| SRG200 |
Limiting |
Leaf |
77.57 |
26022 (−7.5) |
17953 (8.0) |
10496 (20) |
| SRG150 |
Limiting |
Leaf |
77.35 |
27578 (−4.6) |
18506 (7.5) |
10785 (20) |
| SRG100 |
Limiting |
Root |
75.49 |
29527 (−2.8) |
21314 (8.3) |
13574 (26) |
| SRG200 |
Limiting |
Root |
75.91 |
30082 (−1.9) |
21509 (6.1) |
13713 (20) |
| SRG150 |
Limiting |
Root |
79.40 |
29935 (−2.8) |
21745 (4.3) |
13962 (9) |
| SRG100 |
Sufficient |
Leaf |
70.09 |
29004 |
17729 |
10005 |
| SRG200 |
Sufficient |
Leaf |
64.21 |
28124 |
16620 |
8764 |
| SRG150 |
Sufficient |
Leaf |
69.75 |
28915 |
17220 |
8984 |
| SRG100 |
Sufficient |
Root |
73.33 |
30381 |
19679 |
10777 |
| SRG200 |
Sufficient |
Root |
75.52 |
30661 |
20269 |
11475 |
| SRG150 | Sufficient | Root | 76.08 | 30801 | 20840 | 12758 |