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. 2014 Jan 9;2014:979858. doi: 10.1155/2014/979858

Table 2.

Conserved regions of LAAOs from Pseudoalteromonas microorganisms used for design of degenerate primers.

Item Accession no. Sequences ofa
Region 1 Region 2 Region 3
Pseudoalteromonas haloplanktis TAC125 YP_339251 13IIGSGAAAGLS22 225AMAWRAGC232 359MTDFNGKTDL368
Pseudoalteromonas tunicata D2 ZP_01132853 13IIGSGAAAGLS22 224AMAWRAGC231 357MTDFNGKTDL366
Pseudoalteromonas atlantica T6c YP_662716 13IIGSGAAAGLS22 222AMAWRAGC230 359VTDFNAKTDL368
Pseudoalteromonas sp. SM9913 YP_004069407 13IIGSGAAAGLS22 225AMAWRAGC232 359MTDFNGKTDL368
Degenerate primerb ZZ-2: 5′-ATTATHGGYAGCGGCGC-3′ ZZ-3: 5′-GCHATGGCDTGGCGTGC-3′ 
ZF-2: 5′-CCHGCACGCCAHGCCAT-3′
ZF-3: 5′-TDSCATTAAAGTCRGTC-3′

aBoldface letters indicate the specific amino acids actually used in the design of the degenerate primers (forward primers: ZZ-2 and ZZ-3; reverse primers: ZF-2 and ZF-3).