Table A1.
Comparison between mapping and blastx analysis of selected Scalindua genes at station PA5.
| BLASTX SOLID READS OF PA5 | ||||||||
|---|---|---|---|---|---|---|---|---|
| Blastx | Exp = 1,0 | 4583105 | ||||||
| Gene | Name | Mapped reads | Hit | No blast hit | Perc no hit | % of total reads | Coverage | Gene length |
| scal_03295 | hdh | 4942 | 4137 | 805 | 16 | 0.1078 | 130.3403 | 1587 |
| scal_01318 | hzsA | 4525 | 3326 | 1199 | 26 | 0.0987 | 68.6906 | 2421 |
| scal_00863 | narG | 5366 | 3553 | 1813 | 34 | 0.1171 | 50.7862 | 3498 |
| scal_02098 | nirS | 3489 | 2333 | 1156 | 33 | 0.0761 | 68.6985 | 1698 |
| scal_02114 | acsA | 2408 | 1554 | 854 | 35 | 0.0525 | 63.3768 | 1226 |
| scal_02521 | fths | 5280 | 4053 | 1227 | 23 | 0.1152 | 118.1633 | 1715 |
| Average | 27.83 | |||||||
| BLASTX ION TORRENT READS OF PA5 | ||||||||
| Exp = 0.0001 | % of total reads | Coverage | ||||||
| All genes | 22092 | 22031 | 61 | 0.27611805 | 99.723882 | |||
| scal_03295 | hdh | 80 | 79 | 1 | 1.2500 | 0.3576 | 8.7114 | 1587 |
| scal_01318 | hzsA | 65 | 65 | 0 | 0.0000 | 0.2942 | 4.6985 | 2421 |
| scal_00863 | narG | 74 | 73 | 1 | 1.3514 | 0.3304 | 3.6521 | 3498 |
| scal_02098 | nirS | 49 | 49 | 0 | 0.0000 | 0.2218 | 5.0501 | 1698 |
| scal_02114 | acsA | 25 | 25 | 0 | 0.0000 | 0.1132 | 3.5685 | 1226 |
| scal_02521 | fths | 70 | 70 | 0 | 0.0000 | 0.3169 | 7.1429 | 1715 |