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. 2014 Feb 5;9(2):e88040. doi: 10.1371/journal.pone.0088040

Table 2. Analysis of association between MMP-1 SNPs and the risk of occurrence of gastric cancer.

Genotype GC Patient Controls OR 95% CI P value
n % N %
MMP-1.1 (−1607 1G/2G) 145 145
1G1G 23 15.9 20 13.8 1 (Ref)
1G2G 66 45.5 72 49.7 0.742 0.353–1.559 0.430
2G2G 56 38.6 53 36.6 0.746 0.340–1.637 0.465
1G2G+2G2G 122 84.1 125 86.3 0.742 0.364–1.511 0.411
1G allele 112 38.6 112 38.6 1 (Ref)
2G allele 178 61.4 178 61.4 1.000 0.716–1.397 1.000
MMP-1.2 (−519 A/G) 145 145
AA 91 62.8 100 69.0 1 (Ref)
AG 49 33.8 41 28.3 1.154 0.672–1.982 0.603
GG 5 3.4 4 2.8 1.640 0.382–7.047 0.506
AG+GG 54 37.2 45 31.0 1.194 0.705–2.020 0.510
A allele 231 79.7 241 83.1 1 (Ref)
G allele 59 20.3 49 16.9 1.256 0.826–1.911 0.337
MMP-1.3 (−422 T/A) 145 145
TT 17 11.7 17 11.7 1.221 0.547–2.725 0.626
TA 53 36.6 51 35.2 1.000 0.581–1.722 0.999
AA 75 51.7 77 53.1 1 (Ref)
TA+TT 70 48.3 68 46.9 1.065 0.646–1.755 0.806
T allele 87 30 85 29.3 1.034 0.724–1.476 0.927
A allele 203 70 205 70.7 1 (Ref)
MMP-1.4 (−340 T/C) 145 145
TT 69 47.6 78 53.8 1 (Ref)
TC 64 44.1 57 39.3 1.209 0.719–2.032 0.474
CC 12 8.3 10 6.9 1.499 0.556–4.043 0.424
TC+CC 76 52.4 67 46.2 1.246 0.757–2.051 0.388
T allele 202 69.7 213 73.4 1 (Ref)
C allele 88 30.3 77 26.6 1.205 0.839–1.73 0.357
MMP-1.5 (−320 T/C) 145 145
TT 73 50.3 67 46.2 1 (Ref)
TC 61 42.1 64 44.1 0.769 0.454–1.303 0.329
CC 11 7.6 14 9.7 0.650 0.259–1.631 0.358
TC+CC 72 49.7 74 53.8 0.734 0.443–1.214 0.228
T allele 207 71.4 198 69.3 1 (Ref)
C allele 83 28.6 92 31.7 0.863 0.605–1.231 0.469

Adjusted OR calculated for age, sex and addiction, by binary logistic regression model using SPSS v16.0 software. P value is for χ2 test showing the significance of difference in the distributions of the genotypes and alleles between patients and controls. OR = Odds ratio, CI = Confidence Interval, Ref = Reference genotype or allele to calculate OR.