Table 3.
(a) | ||||||||
---|---|---|---|---|---|---|---|---|
MYC: ChIP-chip | Ramos |
MYC: ChIP-chip | Mutu |
|||||
TP | FP | Fisher's exact test p-value of inferred interactions | TP | FP | Fisher's exact test p-value of inferred interactions | |||
HG-U95Av2 | ||||||||
DPI1 | 214 | 258 | 0.1428 | DPI1 | 170 | 302 | 3.09×10−6 | |
DPI2 | 210 | 249 | 0.1077 | DPI2 | 167 | 292 | 1.85×10−6 | |
DPI3 | 209 | 246 | 0.09444 | DPI3 | 166 | 289 | 1.63×10−6 | |
DPI4 | 209 | 245 | 0.08747 | DPI4 | 166 | 288 | 1.40×10−6 | |
gain | 5 | 13 | n.a. | gain | 4 | 14 | n.a. | |
(b) | ||||||||
HG-U95Av2 | total gain between DPI1 and DPI4(nested) | Ramos |
total gain between DPI1 and DPI4(nested) | Mutu |
||||
TP | FP | hypergeometric test p-value | TP | FP | hypergeometric test p-value | |||
18 | 5 | 13 | 0.01779333 | 18 | 4 | 14 | 2.87×10−4 |