Table 4.
(a) | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
BCL6: shRNA library | LY7 |
BCL6: shRNA library | Pfeiffer |
BCL6: shRNA library | VAL |
|||||||
TP | FP | Fisher's exact test p-value of inferred interactions | TP | FP | Fisher's exact test p-value of inferred interactions | TP | FP | Fisher's exact test p-value of inferred interactions | ||||
HG-U95Av2 | ||||||||||||
DPI1 | 54 | 280 | 0.0136 | DPI1 | 144 | 190 | 1.06×10−7 | DPI1 | 117 | 217 | 6.97×10−5 | |
DPI2 | 57 | 265 | 0.001614 | DPI2 | 146 | 176 | 1.60×10−9 | DPI2 | 118 | 204 | 6.32×10−6 | |
DPI3 | 56 | 262 | 0.001988 | DPI3 | 144 | 174 | 2.28×10−9 | DPI3 | 117 | 201 | 5.54×10−6 | |
DPI4 | 56 | 262 | 0.001988 | DPI4 | 144 | 174 | 2.28×10−9 | DPI4 | 117 | 201 | 5.54×10−6 | |
gain | 2 | 18 | n.a. | gain | 0 | 16 | n.a. | gain | 0 | 16 | n.a. | |
(b) | ||||||||||||
HG-U95Av2 | total gain between DPI1 and DPI4(nested) | LY7 |
total gain between DPI1 and DPI4(nested) | Pfeiffer |
total gain between DPI1 and DPI4(nested) | VAL |
||||||
TP | FP | hypergeometric test p-value | TP | FP | hypergeometric test p-value | TP | FP | hypergeometric test p-value | ||||
20 | 2 | 18 | 5.60×10−14 | 16 | 0 | 16 | 8.64×10−7 | 16 | 0 | 16 | 2.53×10−8 |