Table 1.
References | Accession number | Database | Number of arrays selected | Name in this paper | Nitrate concentration (mM) | Time treatment (min) | Tissue | Growth stage | Growth condition |
---|---|---|---|---|---|---|---|---|---|
Wang et al., 2003 | NASCARRAYS-479 | NASC Arrays | 4 | 1 | 0.25 | 20 | Whole roots | Seedling | Hydroponic |
Wang et al., 2004 | NASCARRAYS-480 | NASC Arrays | 4 | 2 | 5 | 120 | Whole roots | Seedling | Hydroponic |
Gutiérrez et al., 2007a | E-MEXP-828 | Array Express | 8 | 3 | 5 | 480 | Whole roots | Adult | Hydroponic |
4 | 10 | 480 | Whole roots | Adult | Hydroponic | ||||
5 | 15 | 480 | Whole roots | Adult | Hydroponic | ||||
Gifford et al., 2008 | GSE7631 | GEO | 42 | 6 | 5 | 120 | Lateral root cap | Seedling | Hydroponic |
7 | 5 | 120 | Epidermis + Cortex | Seedling | Hydroponic | ||||
8 | 5 | 120 | Endodermis + Pericycle | Seedling | Hydroponic | ||||
9 | 5 | 120 | Pericycle | Seedling | Hydroponic | ||||
10 | 5 | 120 | Stele | Seedling | Hydroponic | ||||
11 | 5 | 120 | Whole roots | Seedling | Hydroponic | ||||
12 | 5 | 210 | Whole roots | Seedling | Hydroponic | ||||
Krouk et al., 2010a | GSE20044 | GEO | 24 | 13 | 1 | 3 | Whole roots | Seedling | Hydroponic |
14 | 1 | 6 | Whole roots | Seedling | Hydroponic | ||||
15 | 1 | 9 | Whole roots | Seedling | Hydroponic | ||||
16 | 1 | 12 | Whole roots | Seedling | Hydroponic | ||||
17 | 1 | 15 | Whole roots | Seedling | Hydroponic | ||||
18 | 1 | 20 | Whole roots | Seedling | Hydroponic | ||||
Hu et al., 2009 | GSE9148 | GEO | 6 | 19 | 25 | 30 | Whole roots | Seedling | Hydroponic |
Ruffel et al., 2011 | GSE22966 | GEO | 18 | 20 | 5 | 120 | Whole roots | Seedling | Agar plates |
21 | 5 | 480 | Whole roots | Seedling | Agar plates | ||||
22 | 5 | 2880 | Whole roots | Seedling | Agar plates | ||||
Patterson et al., 2010 | GSE29589 | GEO | 9 | 23 | 1 | 90 | Whole roots | Seedling | Hydroponic |
24 | 1 | 480 | Whole roots | Seedling | Hydroponic | ||||
Vidal et al., 2013 | GSE35544 | GEO | 6 | 25 | 5 | 120 | Whole roots | Seedling | Hydroponic |
Álvarez et al., submitted | GSE43011 | GEO | 6 | 26 | 5 | 120 | Whole roots | Seedling | Hydroponic |
Wang et al., 2007 | NASCARRAYS-481 | NASCArrays | 4 | 27 | 0.25 | 20 | Whole roots | Seedling | Hydroponic |