Figure 2.
Venn diagram of common genes with significantly increased expression levels in xylose culture compared to glucose (A), with significantly decreased expression levels in xylose culture compared to glucose (B), with significantly increased expression levels in MA-R4 compared to MA-B4 (C), and with significantly decreased expression levels in MA-R4 compared to MA-B4 (D). The total number inside each circle represents the number of genes showing a >2-fold change with carbon source or yeast strain in that particular comparison, i.e. 925 up-regulated and 905 down-regulated genes for MA-R4 Xylose/Glucose (C1, Table 2), 1059 up-regulated and 1091 down-regulated genes for MA-B4 Xylose/Glucose (C2, Table 2), 208 up-regulated and 373 down-regulated genes for Xylose MA-R4/MA-B4 (C3, Table 2), and 239 up-regulated and 337 down-regulated genes for Glucose MA-R4/MA-B4 (C4, Table 2).