Skip to main content
. 2014 Jan 14;6(1):223–242. doi: 10.3390/v6010223

Figure 1.

Figure 1

The 455 bp DNA sequence of the full-length transcript of the bidirectional gene promoter of the CLCuBuV coordinates from 2595–292 nucleotides in the viral genome. The putative motifs are in bold and underlined. The replication initiation site/putative stem-loop motif was composed of 35 bp consisting of ATC-motif (GGCCATCC) and GC-rich region (GGCCGCGC) around the nonanucleotide. The conserved late element (CLE) was present at position +185 was suggested to functional target for C2. The POLASIG3 motif (AATAAT) was also identified at position +242. The TATA-box for Rep promoter was found at position 65 nucleotide and TATA-box for Cp promoter was located at position 259 nucleotide in the LIR. The Box-II are predicted at position 433 in the LIR. MBS (MYB drought responsive element) was found at position 20 within the LIR. The labeling of motifs are indicated above the line. The right-side numbering shows the position of LIR in the genome.