Table 2.
Homologues of β-lactamase genes detected in the human gut microbiota via PCR techniques
| Accession # | Gene description | Closest homologue | E value | % identity |
|---|---|---|---|---|
|
Bla
TEM
|
|
|
|
|
|
ADE18890.1 |
β-lactamase TEM-1 |
S. enterica subsp. enterica |
5e-154 |
99 |
|
AAS46844.1 |
β-lactamase TEM-1 |
S. marcescens |
2e-156 |
100 |
|
AEN02824.1 |
β-lactamase TEM-1 |
K. pneumoniae |
3e-111 |
99 |
|
AEN02817.1 |
β-lactamase TEM-1 |
K. pneumoniae |
1e-113 |
99 |
|
ACV88636.1 |
β-lactamase TEM-1 |
E. coli |
2e-151 |
99 |
|
AEL87577.1 |
ES β-lactamase TEM-116 |
Vibrio parahaemolyticus |
5e-154 |
99 |
|
AEQ55231.1 |
β-lactamase TEM-1 |
E. coli |
1e-35 |
45 |
|
ABQ14376.1 |
β-lactamase |
Uncultured soil bacterium |
6e-05 |
83 |
|
ADN79104.1 |
β-lactamase TEM |
Escherichia vulneris |
1e-15 |
86 |
|
WP_010157942.1 |
β-lactamase TEM |
Sar 86 cluster bacterium |
9e-122 |
83 |
|
ACI29961.1 |
β-lactamase TEM-1 |
E. coli |
2e-153 |
99 |
|
AEQ39590.1 |
β-lactamase TEM-195 |
E. coli |
5e-93 |
96 |
|
AAM22276.1 |
β-lactamase TEM-96 |
E. coli |
7e-139 |
94 |
|
WP_019405145.1 |
β-lactamase TEM |
K. pneumoniae |
4e-155 |
99 |
|
AEW28787.1 |
β-lactamase TEM-1 |
Uncultured bacterium |
1e-133 |
100 |
|
ABY81267.1 |
β-lactamase |
E. coli |
4e-156 |
100 |
|
AAF74292.1 |
ES β-lactamase |
E. coli |
5e-155 |
99 |
|
AFU53026.1 |
KPC-2 β lactamase |
S. marcescens |
2e-112 |
98 |
|
ADE18896.1 |
β-lactamase TEM-1 |
Salmonella enterica |
2e-113 |
99 |
|
AEN02826.1 |
β-lactamase TEM-1 |
K. pneumoniae |
4e-113 |
99 |
|
Bla
ROB
|
|
|
|
|
|
YP_252228.1 |
Hypothetical protein SH0313 |
S. haemolyticus |
2e-33 |
44 |
|
Bla
SHV
|
|
|
|
|
|
WP_009348253.1 |
Hypothetical protein HMPREF 9332 |
Alloprevotella rava |
3e-07 |
56 |
|
WP_017896153.1 |
β-lactamase |
K. pneumoniae subsp. pneumoniae |
0.0 |
99 |
|
WP_008157744.1 |
Hypothetical protein HMPREF 1077 |
Parabacteroides johnsonii |
1.5 |
29 |
|
CAJ47138.2 |
β-lactamase |
K. pneumoniae |
0.0 |
99 |
|
ADU15837.1 |
BlaSHV132 |
K. pneumoniae |
0.0 |
99 |
|
AEK80394.1 |
β-lactamase SHV140 |
K. pneumoniae |
0.0 |
99 |
|
ABS72351.1 |
β-lactamase SHV103 |
K. pneumoniae |
0.0 |
99 |
|
AAP03063.1 |
β-lactamase SHV48 |
K. pneumoniae |
0.0 |
99 |
|
AEG79634.1 |
ES β-lactamase SHV120 |
E. coli |
|
99 |
|
Bla
CTX-M
|
|
|
|
|
|
ABG46354.1 |
ES β-lactamase |
E. coli |
3e-139 |
99 |
|
AEZ49563.1 |
β-lactamase CTX-M-1 |
E. coli |
2e-138 |
99 |
|
AEZ49551.1 |
β-lactamase CTX-M-1 |
K. pneumoniae |
1e-139 |
100 |
|
ABG46356.1 |
ES β-lactamase |
K. pneumoniae |
9e-139 |
97 |
|
ABW06480.1 |
ES β lactamase CTX-M-15 |
K. pneumoniae |
6e-51 |
94 |
|
AAB22638.1 |
β-lactamase penicillin hydrolase |
E. coli |
9e-140 |
100 |
|
BAD16611.1 |
β-lactamase CTX-M-36 |
E. coli |
8e-139 |
99 |
|
YP_003717483.1 |
β-lactamase |
E. coli |
2e-139 |
100 |
| ABN09669.1 | β-lactamase CTX-M-61 | S. enterica | 2e-138 | 100 |
ESBL: extended spectrum β-lactamase. Gene names are in bold.