Table 4.
Proposed features of IGS1, ITS, and the combination of IGS1 and ITS regions computed in the current study.
| Region | Number of sequences considered | Variation among population (%) | Variation within population (%) | Conserved sites | Variable sites | Parsimony informative sites | Singleton sites | Total number of haplotypes | Overall mean distance (diversity) |
|---|---|---|---|---|---|---|---|---|---|
| IGS1 | 22 | 88.98 | 11.02 | 512/555 92.25% |
42/555 7.57% |
30/555 5.41% |
12/555 2.16% |
14 | 0.019 |
| ITS1&2 | 19 | 92.73 | 7.27 | 447/704 63.49% |
239/704 33.95% |
105/704 14.91% |
124/704 17.61% |
12 | 0.043 |
| IGS1 + ITS1&2 | 21 | 91.82 | 8.18 | 958/1259 76.09% |
282/1259 22.40% |
141/1259 11.20% |
131/1259 10.41% |
16 | 0.051 |