Table 2.
Comparison of the putative CTFV amino acid sequences with those of other flaviviruses.
Proteins | CTFV HE574573 |
CxFV AB262759 |
QBV NC_012671 |
CFAV NC_001564 |
WNV AJ965628 |
JEV NC_001437 |
YFV NC_002031 |
TBEV NC_001672 |
MDV NC_003635 |
||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sizea | Sizea | ID% | Sizea | ID% | Sizea | ID% | Sizea | ID% | Sizea | ID% | Sizea | ID% | Sizea | ID% | Sizea | ID% | |
AnchorC | 136 | 139 | 44.6 | 136 | 49.6 | 136 | 52.4 | 122 | 17.1 | 127 | 16.9 | 121 | 16.2 | 112 | 23.3 | 110 | 18.3 |
C | 115 | 118 | 45.8 | 116 | 50.9 | 115 | 52.5 | 104 | 17.7 | 105 | 18.2 | 101 | 18.3 | 96 | 24.8 | 91 | 19.0 |
preM | 143 | 143 | 75.7 | 142 | 76.2 | 142 | 74.8 | 167 | 18.1 | 167 | 17.9 | 164 | 18.4 | 168 | 18.4 | 87 | 11.5 |
M | 59 | 60 | 76.7 | 59 | 79.7 | 59 | 78.0 | 78 | 12.3 | 75 | 10.6 | 75 | 14.7 | 75 | 11.5 | 75 | 13.2 |
E | 427 | 427 | 74.0 | 427 | 77.1 | 422 | 79.4 | 501 | 19.1 | 500 | 19.7 | 493 | 16.4 | 496 | 19.6 | 482 | 16.2 |
NS1 | 369 | 369 | 70.5 | 369 | 73.7 | 395 | 37.0 | 352 | 24.2 | 352 | 23.2 | 352 | 25.6 | 352 | 26.8 | 353 | 23.1 |
NS2a | 228 | 230 | 62.2 | 229 | 63.3 | 232 | 18.6 | 231 | 14.9 | 227 | 16.4 | 224 | 14.3 | 230 | 16.2 | 221 | 13.8 |
NS2b | 143 | 142 | 62.9 | 143 | 53.1 | 124 | 17.1 | 131 | 16.6 | 131 | 17.7 | 130 | 19.2 | 131 | 19.0 | 132 | 16.7 |
NS3 | 577 | 578 | 71.0 | 578 | 77.7 | 577 | 44.5 | 619 | 31.8 | 619 | 31.8 | 623 | 32.1 | 621 | 27.9 | 618 | 32.0 |
NS4a | 189 | 189 | 53.4 | 188 | 60.5 | 145 | 18.1 | 149 | 15.9 | 126 | 13.4 | 126 | 12.4 | 126 | 14.7 | 121 | 15.3 |
NS4b | 257 | 257 | 63.3 | 258 | 60.9 | 257 | 18.3 | 255 | 15.4 | 255 | 14.6 | 250 | 18.0 | 252 | 14.6 | 254 | 17.3 |
NS5 | 889 | 889 | 81.4 | 889 | 83.9 | 888 | 60.3 | 905 | 43.7 | 905 | 43.2 | 905 | 42.7 | 903 | 42.0 | 898 | 45.0 |
ORF | 3357 | 3363 | 70.7 | 3359 | 73.3 | 3341 | 48.1 | 3433 | 27.1 | 3432 | 27.3 | 3411 | 27.4 | 3414 | 26.9 | 3374 | 27.1 |
Number of amino acid residues; ID% indicates the percentages of amino acid sequence identity.
CFAV – cell fusing agent virus, CxFV – Culex flavivirus, CTFV – Culex theileri flavivirus, JEV – Japanese Encephalitis virus, MDV – Modoc virus, QBV – Quang Binh virus, TBEV – Tick-Borne Encephalitis virus, WNV – West Nile virus, YFV – Yellow Fever virus.