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. Author manuscript; available in PMC: 2014 Feb 10.
Published in final edited form as: Pigment Cell Melanoma Res. 2012 Nov 6;26(1):97–112. doi: 10.1111/pcmr.12031

Table 1.

Target genes identified as modulators of CDDO-Me efficacy in melanoma cells.

Top 20 genes (siRNAs significantly potentate CDDO-Me in A375 cells Description p- Value (1 × 10−4) Fold Changes
GNPAT Glyceronephosphate O-acyltransferase 2.82 7.48
SUMO1 SMT3 suppressor of inif two 3 homolog 1 (S. cerevisiae) 5.74 4.23
HOXC9 Homeabox C9 1.02 3.49
SPINT2 Serine peptidase inhibitor. Kunitz type, 2 1.24 3.32
HLCS Holocarboxylase synthelase 5.77 3.30
GMPR Guanosine monophosphate reductase 4.67 3.08
FLII Friend leukemia virus integration 1 3.61 3.07
SSX1 Synovial sarcoma, X breakpoint 1 2.89 2.99
FOXK2 Forkhead box- K2 3.68 2.33
ATP2A2 ATPaxe, Ca2- Iransporimg cardiac, muscle, slow switch 2 3.00 2.31
PDCD61P Programmed cell death 6 interacting protein 0.781 2.07
ITGAX Itegrin, alpha X (complement component 3 receptor & subunit) 2,02 1.94
IRX4 Iroquois homeobox 4 4.99 1.87
RBPSUIIL Recombination signal binding protein for immunoglobulin kappa J region-like 0.502 1.76
KIF5A Kinesin family member 5A 3.81 1.72
NKX2-8 NK2 homoebox 8 5.49 1.54
UPP1 Uridine, phosphorylase 1 4.52 1.52
SETDB1 SET domain, bifurcated 1 2.70 1.48
SLX1 SLX1 homeobax 1 4.39 1.38
II2AFY II2A histone family, member Y 4 63 1.31
Top general molecular and cellular function for 35 genes identify by siRNA screen IPAp-Value Number of identified genes
Cell death 1.49 × 10−3–4.71 × 10−2 5
Cell niLiiphalugv 1.49 × 10−3–3.95 × 10−2 3
Cellular assembly and organization 1.49 × 10−3–3.37 × 10−2 4
Cellular growth und. prolifeiiition 1.49 × 10−3–4.66 × 10−2 4
DNA repication and repair 1.49 × 10−3–2.98 × 10−2 1
Top interaction signaling networks for 35 genes identify by siRNA screen IPA Score Number of identified genes
Cell development, cell growth and proliferation 11 15
Developmental disorder
Organismal development 2~3 3
Nervous system development, and function
Tissue morphology
Reproductive system development and function
Visual system development and function
Metabilic disease 2 1
Genetic disorder
Lipid metabolism